Evolving Exascale Applications Via Graphs

By Tiffany Trader

April 29, 2014

There is little point to building expensive exaflop-class computing machines if applications are not available to exploit the tremendous scale and parallelism. Consider that exaflop-class supercomputers will exhibit billion-way parallelism, and that calculations will be restricted by energy consumption, heat generation, and data movement. This level of complexity is sufficient to stymy application development, which is why simplifying the development process is a crucial part of a unified exascale strategy.

PNNL LULESH graph 600x

This formal CnC graph was developed from an initial sketch of LULESH mapped on a whiteboard and embodies good software design practice.

Evolving applications toward exascale is one of the main aims of the Data Intensive Scientific Computing group at Pacific Northwest National Laboratory. Scientists there are working to establish formal design processes based on Concurrent Collections (CnC), a graph programming model that combines task and data parallelism.

In a short writeup highlighting their work, the group notes that “hiding the complexities that underpin exascale system operations from application developers is a critical challenge facing teams designing next-generation supercomputers.” By combining task and data parallelism, the scientists are progressing toward this important goal.

The team used their technique to transform the Livermore Unstructured Lagrangian Explicit Shock Hydrodynamics (LULESH) proxy application code that models hydrodynamics (the motion of materials relative to each other when subjected to forces) into a complete CnC specification. The specification can be implemented and executed using a paradigm that takes advantage of the massive parallelism and power-conserving features of future exaflop-class systems.

“By developing formal processes that capture data and control dependencies and separate computations from implementation issues, the complexities of exascale systems can be hidden, dramatically decreasing development cost and increasing opportunities for automatic performance optimizations,” explains an article from PNNL highlighting the research.

Instead of the time-consuming method of generating code via trial and error, the CnC specification begins with an overview of the dataflow between software components. The next step is formalizing opportunities for analysis and optimization of parallelism, energy efficiency, data movement, and faults. In the case of the CnC model for LULESH, the team started with a whiteboard sketch that came out of an application workshop. Domain experts with functional knowledge provided the application logic for the original assessment. The sketch was transformed into a formal graph at which point the PNNL scientists performed static analysis, applied optimization techniques, and identified bugs. Thus some costs commonly associated with development and testing processes were reduced before any code was written.

“The formalization of scientific applications as graphs is extremely important and enlightening,” said Dr. John Feo, director of the Center for Adaptive Supercomputer Software and Data Intensive Scientific Computing group lead at PNNL. “In addition to providing a natural and obvious pathway for application development, we identified communications and optimization issues that could be addressed with added clarity before the computation steps were even implemented.”

LULESH code was segmented into smaller parts, each corresponding to the formal CnC procedures. Then, the LULESH code was wrapped in CnC steps before executing the application to assess its correctness.

The CnC application method now is being applied to a second software code, MiniGMG, another compact geometric multigrid benchmark for optimization, architecture, and algorithmic research. PNNL’s Data Intensive Scientific Computing group also is engaged in using LULESH to develop and evaluate other tuning models.

This research was carried out as part of the Traleika Glacier X-Stack program, which brings together industrial, academic, and DOE Co-Design centers to address exascale software stack applications. The Traleika Glacier team includes: Intel, the University of Delaware, ET International, Reservoir Labs, the University of Illinois at Urbana-Champaign, Rice University, the University of California, San Diego, and PNNL.

Subscribe to HPCwire's Weekly Update!

Be the most informed person in the room! Stay ahead of the tech trends with industry updates delivered to you every week!

Mystery Solved: Intel’s Former HPC Chief Now Running Software Engineering Group 

April 15, 2024

Last year, Jeff McVeigh, Intel's readily available leader of the high-performance computing group, suddenly went silent, with no interviews granted or appearances at press conferences.  It led to questions -- what's Read more…

Exciting Updates From Stanford HAI’s Seventh Annual AI Index Report

April 15, 2024

As the AI revolution marches on, it is vital to continually reassess how this technology is reshaping our world. To that end, researchers at Stanford’s Institute for Human-Centered AI (HAI) put out a yearly report to t Read more…

Crossing the Quantum Threshold: The Path to 10,000 Qubits

April 15, 2024

Editor’s Note: Why do qubit count and quality matter? What’s the difference between physical qubits and logical qubits? Quantum computer vendors toss these terms and numbers around as indicators of the strengths of t Read more…

Intel’s Vision Advantage: Chips Are Available Off-the-Shelf

April 11, 2024

The chip market is facing a crisis: chip development is now concentrated in the hands of the few. A confluence of events this week reminded us how few chips are available off the shelf, a concern raised at many recent Read more…

The VC View: Quantonation’s Deep Dive into Funding Quantum Start-ups

April 11, 2024

Yesterday Quantonation — which promotes itself as a one-of-a-kind venture capital (VC) company specializing in quantum science and deep physics  — announced its second fund targeting €200 million. The very idea th Read more…

Nvidia’s GTC Is the New Intel IDF

April 9, 2024

After many years, Nvidia's GPU Technology Conference (GTC) was back in person and has become the conference for those who care about semiconductors and AI. In a way, Nvidia is the new Intel IDF, the hottest chip show Read more…

Exciting Updates From Stanford HAI’s Seventh Annual AI Index Report

April 15, 2024

As the AI revolution marches on, it is vital to continually reassess how this technology is reshaping our world. To that end, researchers at Stanford’s Instit Read more…

Intel’s Vision Advantage: Chips Are Available Off-the-Shelf

April 11, 2024

The chip market is facing a crisis: chip development is now concentrated in the hands of the few. A confluence of events this week reminded us how few chips Read more…

The VC View: Quantonation’s Deep Dive into Funding Quantum Start-ups

April 11, 2024

Yesterday Quantonation — which promotes itself as a one-of-a-kind venture capital (VC) company specializing in quantum science and deep physics  — announce Read more…

Nvidia’s GTC Is the New Intel IDF

April 9, 2024

After many years, Nvidia's GPU Technology Conference (GTC) was back in person and has become the conference for those who care about semiconductors and AI. I Read more…

Google Announces Homegrown ARM-based CPUs 

April 9, 2024

Google sprang a surprise at the ongoing Google Next Cloud conference by introducing its own ARM-based CPU called Axion, which will be offered to customers in it Read more…

Computational Chemistry Needs To Be Sustainable, Too

April 8, 2024

A diverse group of computational chemists is encouraging the research community to embrace a sustainable software ecosystem. That's the message behind a recent Read more…

Hyperion Research: Eleven HPC Predictions for 2024

April 4, 2024

HPCwire is happy to announce a new series with Hyperion Research  - a fact-based market research firm focusing on the HPC market. In addition to providing mark Read more…

Google Making Major Changes in AI Operations to Pull in Cash from Gemini

April 4, 2024

Over the last week, Google has made some under-the-radar changes, including appointing a new leader for AI development, which suggests the company is taking its Read more…

Nvidia H100: Are 550,000 GPUs Enough for This Year?

August 17, 2023

The GPU Squeeze continues to place a premium on Nvidia H100 GPUs. In a recent Financial Times article, Nvidia reports that it expects to ship 550,000 of its lat Read more…

DoD Takes a Long View of Quantum Computing

December 19, 2023

Given the large sums tied to expensive weapon systems – think $100-million-plus per F-35 fighter – it’s easy to forget the U.S. Department of Defense is a Read more…

Synopsys Eats Ansys: Does HPC Get Indigestion?

February 8, 2024

Recently, it was announced that Synopsys is buying HPC tool developer Ansys. Started in Pittsburgh, Pa., in 1970 as Swanson Analysis Systems, Inc. (SASI) by John Swanson (and eventually renamed), Ansys serves the CAE (Computer Aided Engineering)/multiphysics engineering simulation market. Read more…

Intel’s Server and PC Chip Development Will Blur After 2025

January 15, 2024

Intel's dealing with much more than chip rivals breathing down its neck; it is simultaneously integrating a bevy of new technologies such as chiplets, artificia Read more…

Choosing the Right GPU for LLM Inference and Training

December 11, 2023

Accelerating the training and inference processes of deep learning models is crucial for unleashing their true potential and NVIDIA GPUs have emerged as a game- Read more…

Baidu Exits Quantum, Closely Following Alibaba’s Earlier Move

January 5, 2024

Reuters reported this week that Baidu, China’s giant e-commerce and services provider, is exiting the quantum computing development arena. Reuters reported � Read more…

Comparing NVIDIA A100 and NVIDIA L40S: Which GPU is Ideal for AI and Graphics-Intensive Workloads?

October 30, 2023

With long lead times for the NVIDIA H100 and A100 GPUs, many organizations are looking at the new NVIDIA L40S GPU, which it’s a new GPU optimized for AI and g Read more…

Shutterstock 1179408610

Google Addresses the Mysteries of Its Hypercomputer 

December 28, 2023

When Google launched its Hypercomputer earlier this month (December 2023), the first reaction was, "Say what?" It turns out that the Hypercomputer is Google's t Read more…

Leading Solution Providers

Contributors

AMD MI3000A

How AMD May Get Across the CUDA Moat

October 5, 2023

When discussing GenAI, the term "GPU" almost always enters the conversation and the topic often moves toward performance and access. Interestingly, the word "GPU" is assumed to mean "Nvidia" products. (As an aside, the popular Nvidia hardware used in GenAI are not technically... Read more…

Shutterstock 1606064203

Meta’s Zuckerberg Puts Its AI Future in the Hands of 600,000 GPUs

January 25, 2024

In under two minutes, Meta's CEO, Mark Zuckerberg, laid out the company's AI plans, which included a plan to build an artificial intelligence system with the eq Read more…

China Is All In on a RISC-V Future

January 8, 2024

The state of RISC-V in China was discussed in a recent report released by the Jamestown Foundation, a Washington, D.C.-based think tank. The report, entitled "E Read more…

Shutterstock 1285747942

AMD’s Horsepower-packed MI300X GPU Beats Nvidia’s Upcoming H200

December 7, 2023

AMD and Nvidia are locked in an AI performance battle – much like the gaming GPU performance clash the companies have waged for decades. AMD has claimed it Read more…

Nvidia’s New Blackwell GPU Can Train AI Models with Trillions of Parameters

March 18, 2024

Nvidia's latest and fastest GPU, codenamed Blackwell, is here and will underpin the company's AI plans this year. The chip offers performance improvements from Read more…

Eyes on the Quantum Prize – D-Wave Says its Time is Now

January 30, 2024

Early quantum computing pioneer D-Wave again asserted – that at least for D-Wave – the commercial quantum era has begun. Speaking at its first in-person Ana Read more…

GenAI Having Major Impact on Data Culture, Survey Says

February 21, 2024

While 2023 was the year of GenAI, the adoption rates for GenAI did not match expectations. Most organizations are continuing to invest in GenAI but are yet to Read more…

Intel’s Xeon General Manager Talks about Server Chips 

January 2, 2024

Intel is talking data-center growth and is done digging graves for its dead enterprise products, including GPUs, storage, and networking products, which fell to Read more…

  • arrow
  • Click Here for More Headlines
  • arrow
HPCwire