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New Method Speeds Tumor Analysis

Oct 27, 2014 |

A novel computational method developed by the computational genomics group at Barcelona Supercomputing Center (BSC) represents a big leap forward for cancer research as well as genome analysis. As detailed in the official announcement and the current issue of Nature Biotechnology, SMUFIN – short for Somatic Mutations Finder – pinpoints the genetic alterations responsible for Read more…

Weekly Twitter Roundup

Oct 23, 2014 |

Here at HPCwire, we want to help keep the HPC community as up-to-date as possible on some of the most captivating news items that were tweeted throughout the week. The tweets that caught our eye this past week are listed below. Check back in next Thursday for an entirely updated list. Click here to view the top tweets Read more…

The Impact of Cyberinfrastructure

Oct 22, 2014 |

Rich Knepper’s talk as part of the International Conference on Infrastructures and Cooperation in E-science and E-humanities, in Leipzig, Germany, tackles the subject of “Living cyberinfrastructures and their impact on scientific research.” Knepper, who is Manager of Campus Bridging and Research Infrastructure at Indiana University, says he started thinking about the idea for the presentation Read more…

Community Grid Fosters Microbial Discovery

Oct 22, 2014 |

An international team of volunteers is putting their spare computing power to work unlocking the secrets of microbes from around the world. By plugging in to IBM’s World Community Grid, contributors are creating a supercomputer that can carry out genetic comparisons of a wide variety of tiny organisms that are too small to see with the naked eye. Read more…

ESnet Deploys 100G Connectivity Across Atlantic

Oct 21, 2014 |

The Department of Energy’s (DOE’s) Energy Sciences Network, or ESnet, is gearing up to deploy four new high-speed transatlantic links with a total capacity of 340 gigabits-per-second, significantly boosting network speeds between US research sites and European facilities. The trans-Atlantic expansion adds four separate links connecting Boston, New York and Washington DC with Amsterdam, London Read more…

Is the City of the Future Finally Here?

Oct 21, 2014 |

Grid computing pioneer and big data visionary Charlie Catlett recently delivered a presentation on “Big Data and the Future of Cities” as part of the Argonne OutLoud series, hosted by Argonne National Laboratory. Catlett explores how emerging technologies in high-performance computing, embedded systems and data analytics can help mitigate some of the challenges associated with Read more…

Minimizing Drug Side Effects with HPC

Oct 20, 2014 |

It’s an unfortunate side effect of the drug development process that unsafe drugs sometimes slip through the extensive vetting period. So far no magic bullet drug has been developed that is completely without risk, but scientists are working hard to root out dangerous side effects, which according to the journal Nature, kill at least 100,000 patients Read more…

Better Software Means Better Research

Oct 20, 2014 |

The Software Sustainability Institute started a petition at Change.org to raise awareness for the critical role that software plays in enabling world-class research. “We must accept that software is fundamental to research, or we will lose our ability to make groundbreaking discoveries,” reads the opening paragraph. “We have become accustomed to technological advances that would Read more…

STEM-Trek: The Entrepreneurial Journey

Oct 20, 2014 |

At the StartupHPC Meetup, November 17, 2014, STEM-Trek Founder Elizabeth Leake will describe how this global, grassroots, nonprofit organization was formed, and its unique business model that involves crowd-sourcing social capital to solicit donated travel points and other services so that scholars from underrepresented groups and regions can attend high-tech conferences. Beneficiaries are encouraged to Read more…

Weekly Twitter Roundup

Oct 16, 2014 |

Here at HPCwire, we want to help keep the HPC community as up-to-date as possible on some of the most captivating news items that were tweeted throughout the week. The tweets that caught our eye this past week are listed below. Check back in next Thursday for an entirely updated list. Click here to view the top tweets Read more…