October 06, 2009
IlluminaCompute offers scalability, turn-key operation and extensive customer support for research organizations of all sizes
HANOVER, Germany, Oct. 6 -- At the BioIT World Europe Conference, Illumina, Inc. announced the launch of IlluminaCompute, a fully integrated computing solution for its Genome Analyzer sequencing platform. Bringing together Illumina's powerful sequencing software with high-performance blade servers from Dell's OEM and Life Sciences Group and modular storage capacity from Isilon Systems, Inc., IlluminaCompute creates a flexible and scalable system for human scale genomic data analysis. The new solution conserves IT resources by providing centralized high-performance computational and storage infrastructure, compared to the support required for individual, decentralized analysis servers.
"Illumina and our IT partners collaborated to address an unmet need for highly scalable computing capabilities that can keep pace with the remarkable growth in the throughput of the Genome Analyzer," said Scott Kahn, vice president and chief information officer. "No other genomics provider currently offers a turn-key solution like IlluminaCompute that can be customized and extended for small and growing sequencing facilities and also scaled to meet the needs of larger genome centers." Because IlluminaCompute can be quickly and easily added to or reconfigured with support from Illumina, researchers can keep pace with changes to their computing needs with virtually no system down-time.
IlluminaCompute is a unique bundling of hardware, informatics software and high-availability storage that is delivered and supported directly by Illumina's Customer Solutions team. The system is tuned specifically for a high-throughput sequence analysis workflow. Server and disk management overhead is kept to an absolute minimum, reducing the need for dedicated IT and bioinformatics staff. The result is a greatly empowered lab. IlluminaCompute provides sufficient processing resources for computational-heavy analysis that requires clustered processing and shared data repositories, such as genome assembly, deep sequencing and metagenomics research.
Comprehensive customer service is a key distinguishing factor with IlluminaCompute. Illumina evaluates customer needs and validates the installation site prior to installation. Once the system is installed and configured for the customer by Illumina technical service, it requires very little intervention or maintenance. From concept and design to activation and training, Illumina is with the customer every step of the way to ensure a fully successful experience with the product.
"IlluminaCompute represents a shared commitment on the part of Illumina, Dell and Isilon to raise the bar in terms of system reliability and minimize the time-to-results, all while lowering the total cost of genomic research," said Jordan Stockton, senior market manager of Computational Biology. "The combination of Isilon's highly scalable yet easy to manage storage system, Dell's reliable and cost effective servers and OEM expertise, and Illumina's industry-leading sequencing technology creates efficiencies that translate directly into better outcomes for researchers."
IlluminaCompute has been developed and validated in coordination with several leading genome centers, to optimize computing and storage technologies and deliver a truly flexible and high-quality product suitable for a wide range of customers. It will be available in November 2009.
About Illumina
Illumina (www.illumina.com) (NASDAQ:ILMN) is the leading developer, manufacturer, and marketer of next-generation life-science tools and integrated systems for the analysis of genetic variation and biological function. Using our proprietary technologies, we provide a comprehensive line of products and services that currently serve the sequencing, genotyping, and gene expression markets, and we expect to enter the market for molecular diagnostics. Our customers include leading genomic research centers, pharmaceutical companies, academic institutions, clinical research organizations, and biotechnology companies. Our tools provide researchers around the world with the performance, throughput, cost effectiveness, and flexibility necessary to perform the billions of genetic tests needed to extract valuable medical information from advances in genomics and proteomics. We believe this information will enable researchers to correlate genetic variation and biological function, which will enhance drug discovery and clinical research, allow diseases to be detected earlier, and permit better choices of drugs for individual patients.
-----
Source: Illumina, Inc.
In quieter times, sounding the bell of funding big science with big systems tends to resonate further than when ears are already burning with sour economic and national security news. For exascale's future, however, the time could be ripe to instill some sense of urgency....
Read more...
In a recent solicitation, the NSF laid out needs for furthering its scientific and engineering infrastructure with new tools to go beyond top performance, Having already delivered systems like Stampede and Blue Waters, they're turning an eye to solving data-intensive challenges. We spoke with the agency's Irene Qualters and Barry Schneider about..
Read more...
Large-scale, worldwide scientific initiatives rely on some cloud-based system to both coordinate efforts and manage computational efforts at peak times that cannot be contained within the combined in-house HPC resources. Last week at Google I/O, Brookhaven National Lab’s Sergey Panitkin discussed the role of the Google Compute Engine in providing computational support to ATLAS, a detector of high-energy particles at the Large Hadron Collider (LHC).
Read more...
May 23, 2013 |
The study of climate change is one of those scientific problems where it is almost essential to model the entire Earth to attain accurate results and make worthwhile predictions. In an attempt to make climate science more accessible to smaller research facilities, NASA introduced what they call ‘Climate in a Box,’ a system they note acts as a desktop supercomputer.
Read more...
May 22, 2013 |
At some point in the not-too-distant future, building powerful, miniature computing systems will be considered a hobby for high schoolers, just as robotics or even Lego-building are today. That could be made possible through recent advancements made with the Raspberry Pi computers.
Read more...
May 16, 2013 |
When it comes to cloud, long distances mean unacceptably high latencies. Researchers from the University of Bonn in Germany examined those latency issues of doing CFD modeling in the cloud by utilizing a common CFD and its utilization in HPC instance types including both CPU and GPU cores of Amazon EC2.
Read more...
May 15, 2013 |
Supercomputers at the Department of Energy’s National Energy Research Scientific Computing Center (NERSC) have worked on important computational problems such as collapse of the atomic state, the optimization of chemical catalysts, and now modeling popping bubbles.
Read more...
05/10/2013 | Cleversafe, Cray, DDN, NetApp, & Panasas | From Wall Street to Hollywood, drug discovery to homeland security, companies and organizations of all sizes and stripes are coming face to face with the challenges – and opportunities – afforded by Big Data. Before anyone can utilize these extraordinary data repositories, however, they must first harness and manage their data stores, and do so utilizing technologies that underscore affordability, security, and scalability.
04/15/2013 | Bull | “50% of HPC users say their largest jobs scale to 120 cores or less.” How about yours? Are your codes ready to take advantage of today’s and tomorrow’s ultra-parallel HPC systems? Download this White Paper by Analysts Intersect360 Research to see what Bull and Intel’s Center for Excellence in Parallel Programming can do for your codes.
In this demonstration of SGI DMF ZeroWatt disk solution, Dr. Eng Lim Goh, SGI CTO, discusses a function of SGI DMF software to reduce costs and power consumption in an exascale (Big Data) storage datacenter.
The Cray CS300-AC cluster supercomputer offers energy efficient, air-cooled design based on modular, industry-standard platforms featuring the latest processor and network technologies and a wide range of datacenter cooling requirements.