Since 1986 - Covering the Fastest Computers
in the World and the People Who Run Them
Visit additional Tabor Communication Publications
November 22, 2010
Blood Simulation on Jaguar Takes Gordon Bell Prize
Winning team simulated 200 million realistic red blood cells
Nov. 22 -- A team from Georgia Tech, New York University, and Oak Ridge National Laboratory (ORNL) took this year's Gordon Bell Prize by pushing ORNL's Jaguar supercomputer to 700 trillion calculations per second (700 teraflops) with a groundbreaking simulation of blood flow.
The team wins a $10,000 prize provided by HPC pioneer Bell as well as the distinction of having the world's leading scientific computing application.
Another team using Jaguar took an honorable mention in the competition for developing an innovative framework that calculates critical nanoscale properties of materials.
The winning team used 196,000 of Jaguar's 224,000 processor cores to simulate 260 million red blood cells and their interaction with plasma in the circulatory system.
Lawrence Berkeley National Laboratory's Horst Simon, in announcing the winners Thursday, noted that the team achieved a 10,000-fold improvement over previous simulations of its type.
"This team from Georgia Tech, NYU, and Oak Ridge National Lab received the award for obtaining four orders of magnitude improvement over previous work and achieved an impressive more than 700 teraflops on 200,00 cores of the Jaguar system," Simon said. "It's a very significant accomplishment."
Simon noted also that the team simulated realistic, "deformable" blood cells that change shape rather than simpler, but less realistic, spherical red blood cells, calling the approach a "very challenging multiscale, multiphysics problem."
The winning team included Abtin Rahimian, Ilya Lashuk, Aparna Chandramowlishwaran, Dhairya Malhotra, Logan Moon, Aashay Shringarpure, Richard Vuduc, and George Biros of Georgia Tech, Shravan Veerapaneni and Denis Zorin of NYU, and Rahul Sampath and Jeffrey Vetter of ORNL.
An honorable mention in the Gordon Bell competition went to Anton Kozhevnikov and Thomas Schulthess of ETH Zurich, and Adolfo G. Eguiluz of the University of Tennessee, Knoxville, for reaching 1.3 thousand trillion calculations a second, or 1.3 petaflops, and scaling to the full Jaguar system in a method that solves the Schrödinger equation from first principles for electronic systems while minimizing approximations or simplifying assumptions.
The Gordon Bell Prize has been awarded each year since 1987, recognizing the world's top high-performance computing (HPC) application. This year's awards ceremony was conducted in conjunction with SC10, an international meeting of supercomputing experts held New Orleans.
-----
Source: Oak Ridge National Laboratory
Discussion
There are 0 discussion items posted.
|
Join the Discussion |
Sponsored Links
One of the first HPC providers installing a 4X NVIDIA Kepler K-20 cluster. Invites you to a free evaluation on Seneca’s NVIDIA K20 Kepler cluster, pre-loaded with AMBER, NAMD, LAMMPS
High-Performance Computing in Action
Businesses that want to be on the cutting edge of their industries are increasingly turning to high-performance computing (HPC) solutions to handle complex compute processes and speed up their rate of innovation. Download this Executive Brief to see how businesses in energy, life sciences and entertainment put HPC solutions to work in their operations.
- Cray Xtreme-Cool™ Supercomputer: Liquid-cooled architecture delivering superior energy-efficiency, lower TCO and faster ROI.
- Memory Debugging Challenges in Parallel and Distributed Applications
- PGI 2013: OpenMP 1.5X faster than GCC, new GNU-compatible OpenACC C++ compiler, CUDA 5 and Tesla K20 support, and more.
- Receive Higher Application Performance with end-to-end 56GbE
- Acer and Altair simplify cluster computing
- Introducing the Cray CS300 Cluster Supercomputer Series
RSS Feeds
Feeds by Topic
- Applications
- Developer Tools
- Interconnects
- Middleware
- Networks
- Processors
- Storage
- Systems
- Visualization
Feeds by Industry
Feeds by Content Type
- Features
- Blogs
- Short Takes
- Off the Wire
- Whitepapers
- Multimedia
- HPC Soundbite Podcasts
- HPCwire Job Bank
Subscribe to All Content
May 17, 2013
May 16, 2013
- D-Wave Two Quantum Computer Selected for New AI Initiative
- Mines' Powerful New Supercomputer to Focus on Energy Research
- Kitware Develops Customizable Simulation Framework to Provide HPC for Mid-Sized Manufacturers
- Next HPC Installation Step Initiated at High Performance Computing Center Stuttgart
- HybridCluster2.0 Self-Healing, Ultra-High Availability Capabilities Unveiled
May 15, 2013
- Nominations for SC13 Cray, Fernbach and Kennedy Awards Due July 1
- Mellanox Technologies Ltd. Announces Definitive Agreement to Acquire Kotura, Inc.
- NYSERDA Awards $1.8 Million to Rensselaer Polytechnic Institute
- Bright Computing Named Finalist for the 2013 Red Herring Top 100 North America Award
- Flow Science Releases FLOW-3D/MP 5.0
- NEC Establishes NEC Ukraine to Strengthen Operations in Russia and the CIS
- Fujitsu Receives Supercomputer Order From Nagoya University
- Avere Systems Helps Framestore Create Extraordinary Visual Effects for Blockbuster Films
- Workshop on Modeling and Simulation of Exascale Systems Call for Papers
May 14, 2013
- Multimillion Pound Project to Develop Next Generation Computing Systems
- HPC Simulations Target Nanoscale Materials Under Strain
- New IBM Center in Beijing to Speed Linux Applications on Power Systems
- OpenCL Software Development Kit Fosters FPGA Exploitation
- S&P Capital IQ and Kuberre Systems Sign Data Facilitator Agreement
- Solarflare to Speak at Linux Foundation Enterprise End User Summit
May 13, 2013
- SDSC Hosts First Annual Industry Partners Research Review
- AMD Targets Server Performance with Open 3.0 Release
- BICS Selects Infinera DTN-X for 500G Pan-European Network
- Juniper Systems Celebrates its 20th Anniversary
May 10, 2013
- Two ORNL Researchers, Two Joint Faculty Receive DOE Early Career Awards
- ODCA to Hypervisor and VM Providers: Interoperability is an Enterprise Cloud Requirement
- Special ISC’13 Session to Probe the Thinking behind Europe’s Human Brain Project
May 09, 2013
- Ireland Sprouts Native Top Supercomputer List
- Durham University Cluster Boosts Study of the Stars
- Supermicro Ships New 4U 72x 3.5" Hot-Swappable HDD Storage Platform
- Two Virginia Tech Teams Named Finalists in DARPA Spectrum Challenge
May 08, 2013
- Cloud-Ready GlusterFS 3.4 Beta Now Available
- NCSA Hosts 2013 Private Sector Program Annual Meeting May 13-17 in Champaign/Urbana.
- Seagate Unveils Complete SSD Product Line
- Clustered Systems Installs Efficient 100kW Rack at SLAC National Accelerator Laboratory
- Penguin Computing Named Open Compute Project Solution Provider
- Silicon Mechanics Shows Computing and Storage Platforms at TechKnowFile
- OrangeFS Available on AWS Marketplace
- Teradata Introduces In-Memory Technology that Supports Big Data Deployments
May 07, 2013
- Argonne Announces Training Program on Extreme-Scale Computing
- Virtual School Summer Courses Available on Data-Intensive and Many-Core Computing
- Nallatech Joins Altera’s Preferred Board Partner Program for OpenCL
- Vicor's ChiP Power Component Packaging to Make European Debut at PCIM Europe 2013
- Hetzner Online Deploys ADVA 100G Core to Answer Data Growth
- WD And SanDisk To Create Solid State Hybrid Drives
- Solarflare's High-Performance 10GbE Ethernet Adapters Selected for IBM Servers
- CQUniversity Selects SGI to Expand HPC Environment
- Cray Expands XC30 Line with Air-Cooled Option
- AMAX to Showcase Solutions at 2013 Interop IT Conference & Expo
- PRACE Free Autumn School Focuses on Industrial Simulation
- International Symposium on Computer Architecture and HPC: Call for Papers
May 06, 2013
- AMAX Named Official Solutions Provider of Open Compute Project Foundation
- Altera Opens FPGAs to Programmers with SDK, Off-the-Shelf Boards for OpenCL
- 6WIND Announces OpenFlow Compatibility within Open vSwitch Acceleration Platform
- BittWare Joins Altera Preferred Board Partner Program for OpenCL
- Carnegie Mellon Robot Uses Arms, Location and More To Discover Objects
- IEEE TCSC Seeks Young Achievers in Scalable Computing
- ACM Opens Participation Doors for Richard Tapia Diversity in Computing Event
- Broadcom Intros Lowest-Power Multi-port Gigabit PHYs
Most Read Features
- Adapteva Shows Off $99 Supercomputer Boards
- Cray Answers Mid-Market's Call
- The Week in HPC Research
- Intel’s Big Data to HPC Interconnect
- A Conversation with Dr. Hans Meuer and Dr. Horst Gietl
- Big Red II Colors New Page for Hybrid Systems
- NERSC Managers Shed Light on 'Edison'
- The Week in HPC Research
- Emerging Technologies at SC13: A Chat with the Chairs
- The Week in HPC Research
Most Read Around the Web
- Speaking Many Languages into the MIC
- Supercomputing's Golden Age?
- New Tome Tells Modern History of Supercomputing
- CUDA-Designed Robot: It's a Hit!
- Revolutionizing Tornado Prediction
- Sequoia Hits Warp Speed
- HPC and the True Cost of Cloud
- Floating Funding to Exascale Island
- Finnish Researchers Welcome New Cray Super
- Blue Waters: Security at Scale
Most Read This Just In
- IBM and Forrester Webinar to Discuss New Ways to Reduce Cost in HPC and Big Data
- Altera Opens FPGAs to Programmers with SDK, Off-the-Shelf Boards for OpenCL
- New Simulation Speed Record Achieved with Sequoia Supercomputer
- Brain Outperforms Supercomputers
- Argonne Training Program on Extreme-Scale Computing Taking Place July 28 - Aug. 9
- Commercial Quantum Computing Company D-Wave Systems Launches
- HPC System SuperMUC to Deliver 6.4 Petaflops
- XSEDE13 Student Programming Contest Registration Opens April 30
- AMD Targets Server Performance with Open 3.0 Release
- Supercomputers Soar as PC Sales Decline
Most Read Blogs
Feature Articles
Saddling Phi for TACC’s Stampede
The Xeon Phi coprocessor might be the new kid on the high performance block, but out of all first-rate kickers of the Intel tires, the Texas Advanced Computing Center (TACC) got the first real jab with its new top ten Stampede system.We talk with the center's Karl Schultz about the challenges of programming for Phi--but more specifically, the optimization...
Read more...
"No Exascale for You!" An Interview with Berkeley Lab's Horst Simon
Although Horst Simon was named Deputy Director of Lawrence Berkeley National Laboratory, he maintains his strong ties to the scientific computing community as an editor of the TOP500 list and as an invited speaker at conferences.
Read more...
Supercomputing Vet Champions Quantum Cause
Supercomputing veteran, Bo Ewald, has been neck-deep in bleeding edge system development since his twelve-year stint at Cray Research back in the mid-1980s, which was followed by his tenure at large organizations like SGI and startups, including Scale Eight Corporation and Linux Networx. He has put his weight behind quantum company....
Read more...
Short Takes
Running Computational Fluid Dynamics in the Cloud
May 16, 2013 |
When it comes to cloud, long distances mean unacceptably high latencies. Researchers from the University of Bonn in Germany examined those latency issues of doing CFD modeling in the cloud by utilizing a common CFD and its utilization in HPC instance types including both CPU and GPU cores of Amazon EC2.
Read more...
Computing the Physics of Bubbles
May 15, 2013 |
Supercomputers at the Department of Energy’s National Energy Research Scientific Computing Center (NERSC) have worked on important computational problems such as collapse of the atomic state, the optimization of chemical catalysts, and now modeling popping bubbles.
Read more...
Internet2 Awards Program Seeks Innovative Applications
May 10, 2013 |
Program provides cash awards up to $10,000 for the best open-source end-user applications deployed on 100G network.
Read more...
Floating Funding to Exascale Island
May 09, 2013 |
The Japanese government has revealed its plans to best its previous K Computer efforts with what they hope will be the first exascale system...
Read more...
HPC and the True Cost of Cloud
May 08, 2013 |
For engineers looking to leverage high-performance computing, the accessibility of a cloud-based approach is a powerful draw, but there are costs that may not be readily apparent.
Read more...
Sponsored Whitepapers
Best Practices in Big Data Storage
05/10/2013 | Cleversafe, Cray, DDN, NetApp, & Panasas | From Wall Street to Hollywood, drug discovery to homeland security, companies and organizations of all sizes and stripes are coming face to face with the challenges – and opportunities – afforded by Big Data. Before anyone can utilize these extraordinary data repositories, however, they must first harness and manage their data stores, and do so utilizing technologies that underscore affordability, security, and scalability.
Progress in Parallel: the Bull Parallel Programming Center
04/15/2013 | Bull | “50% of HPC users say their largest jobs scale to 120 cores or less.” How about yours? Are your codes ready to take advantage of today’s and tomorrow’s ultra-parallel HPC systems? Download this White Paper by Analysts Intersect360 Research to see what Bull and Intel’s Center for Excellence in Parallel Programming can do for your codes.
Sponsored Multimedia
SGI DMF ZeroWatt Disk Solution
In this demonstration of SGI DMF ZeroWatt disk solution, Dr. Eng Lim Goh, SGI CTO, discusses a function of SGI DMF software to reduce costs and power consumption in an exascale (Big Data) storage datacenter.
Cray CS300-AC Cluster Supercomputer Air Cooling Technology Video
The Cray CS300-AC cluster supercomputer offers energy efficient, air-cooled design based on modular, industry-standard platforms featuring the latest processor and network technologies and a wide range of datacenter cooling requirements.
HPC Job Bank
Featured Events
- June 13, 2013
- June 14, 2013
Think Beyond Plastics Conference
Berkeley, CA
United States
- June 16, 2013
- June 20, 2013
ISC'13
Leipzig,
Germany
.gif)
- June 17, 2013
- June 18, 2013
Forecast 2013
San Francisco, CA
United States
- June 20, 2013
- June 21, 2013
CIO North America
Marina Del Rey, CA
United States
- June 24, 2013
- June 25, 2013
The Trading Show Chicago
Chicago, IL
United States
- June 25, 2013
- June 26, 2013
TERATEC 2013 Forum
Paris,
France
