August 13, 2012
Today, specialized programming frameworks like OpenCL, CUDA or DirectCompute, are the most commonly used methods of tapping into GPUs for general-purpose computing. With all of these, the parallelization of the code as well as the processor-specific manipulations that move the algorithms and data from the CPU to the GPU have to be performed manually. This presents something of a challenge to the average programmer.
Fortunately there are a number of efforts underway to make GPU programming a more high-level affair. One of them was described today in UK’s bit-tech, which reported that a team from Syracuse University has developed a Java compiler aimed at GPU computing. Phil Pratt-Szeliga, an instructor at Syracuse University along, with partners Jim Fawcett and Roy Welch, worked together on the project, known as Rootbeer. In a paper that describes the technology, they claim that Rootbeer is “the most full-featured tool to enable GPU computing from within Java to date.”
The goal was to develop a compiler that could that would allow programmers to use standard Java for GPU computing, without having to know the intricacies of parallel programming or processor hardware. These are not just bindings to CUDA and OpenCL libraries. Rootbeer is able to take unmodified Java source and then, under the covers, automatically parallelize the code and launch the GPU kernel.
Rootbeer supports all standard Java features except dynamic method invocation, reflection and native methods. The features that are supported for the GPU include single and multi-dimensional arrays (primitive and reference types), composite objects, instance and static fields, dynamic memory allocation, inner classes, synchronized methods and monitors, strings, and exceptions that are thrown or caught on the GPU.
The compiler is currently targeted to NVIDIA processors since the hardware offers programmer-friendly support, such as the ability to execute recursive functions. Internally the Java Bytecode is converted to CUDA.
The compiler developers have also developed three applications to demonstrate the compiler’s capabilities. As you can see, execution speedups are not guaranteed:
Pratt-Szeliga says he plans to maintain the compiler indefinitely and is willing to fix any and all bugs sent to him. Rootbeer is available for free as open source software licensed under the GNU General Public License.
Full story at bit-tech
In quieter times, sounding the bell of funding big science with big systems tends to resonate further than when ears are already burning with sour economic and national security news. For exascale's future, however, the time could be ripe to instill some sense of urgency....
Read more...
In a recent solicitation, the NSF laid out needs for furthering its scientific and engineering infrastructure with new tools to go beyond top performance, Having already delivered systems like Stampede and Blue Waters, they're turning an eye to solving data-intensive challenges. We spoke with the agency's Irene Qualters and Barry Schneider about..
Read more...
Large-scale, worldwide scientific initiatives rely on some cloud-based system to both coordinate efforts and manage computational efforts at peak times that cannot be contained within the combined in-house HPC resources. Last week at Google I/O, Brookhaven National Lab’s Sergey Panitkin discussed the role of the Google Compute Engine in providing computational support to ATLAS, a detector of high-energy particles at the Large Hadron Collider (LHC).
Read more...
05/10/2013 | Cleversafe, Cray, DDN, NetApp, & Panasas | From Wall Street to Hollywood, drug discovery to homeland security, companies and organizations of all sizes and stripes are coming face to face with the challenges – and opportunities – afforded by Big Data. Before anyone can utilize these extraordinary data repositories, however, they must first harness and manage their data stores, and do so utilizing technologies that underscore affordability, security, and scalability.
04/15/2013 | Bull | “50% of HPC users say their largest jobs scale to 120 cores or less.” How about yours? Are your codes ready to take advantage of today’s and tomorrow’s ultra-parallel HPC systems? Download this White Paper by Analysts Intersect360 Research to see what Bull and Intel’s Center for Excellence in Parallel Programming can do for your codes.
In this demonstration of SGI DMF ZeroWatt disk solution, Dr. Eng Lim Goh, SGI CTO, discusses a function of SGI DMF software to reduce costs and power consumption in an exascale (Big Data) storage datacenter.
The Cray CS300-AC cluster supercomputer offers energy efficient, air-cooled design based on modular, industry-standard platforms featuring the latest processor and network technologies and a wide range of datacenter cooling requirements.