The Leading Source for Global News and Information Covering the Ecosystem of High Productivity Computing
November 19, 2008
A team led by Thomas Schulthess of Oak Ridge National Laboratory (ORNL) has broken the petaflop barrier with a supercomputing application likely to accelerate the revolution in magnetic storage.
Using ORNL's upgraded Cray XT Jaguar supercomputer, the team was able to achieve a sustained performance of 1.05 quadrillion calculations a second, or 1.05 petaflops, for an application that simulates the behavior of electron systems. Jaguar itself was recently upgraded to a peak performance of 1.64 petaflops, making it the world's first petaflop system dedicated to open scientific research. The team's simulation ran on nearly 150,000 of Jaguar's 180,000-plus processing cores.
Among its benefits, the application promises to advance scientific understanding of magnetic devices such as computer hard drives. In the last couple of decades, hard drive storage capacity has grown at an extraordinary rate. The associated risk, though, is that with increasing storage density, these amazing devices tend to become less stable.
Hard drives hold information by magnetizing tiny regions of a platter, with regions magnetized in one direction counting as ones and in the opposite direction as zeroes. With the exponential growth of storage capacity, these miniscule spots have gotten progressively even smaller; and the smaller the spot, the more likely its magnetic direction is to be incorrectly and unexpectedly reversed. Since disorder at the atomic scale increases with temperature, a hard drive kept as warm as room temperature becomes increasingly susceptible to random changes -- meaning lost data -- as storage density rises.
"A big problem in magnetic recording is that as you make the bits smaller and smaller, thermal excitation will essentially randomize them and you will lose information," explained Markus Eisenbach of ORNL. "If that happens in 500 years you don't care, but if it happens tomorrow you're really unhappy."
The team's current approach differs fundamentally from earlier efforts because it is able to set aside empirical models and their attendant approximations to tackle the system through first-principles calculations. Eisenbach, who serves as the team's developer for the project, noted that this empirical approach was far too computationally intensive for earlier computer systems.
"It's the new Jaguar coming on line that makes it really feasible," he said. "If you have a classical Heisenberg model, an energy calculation takes perhaps milliseconds. For this first-principles calculation, an energy calculation takes tens of seconds. So it's orders of magnitude slower. You really need a computer of that size."
The team simulates the effect of heat on a magnetic material by combining two methods. The first -- known as locally self-consistent multiple scattering, or LSMS -- describes the journeys of scattered electrons by applying density functional theory to solve the Dirac equation, a relativistic wave equation for electron behavior. The code has a robust history, having been the first code to run at a sustained trillion calculations per second and earned its developers the prestigious Gordon Bell Prize in 1998.
The shortcoming of this approach, though, is that it is used primarily to describe a system in its ground state at a temperature of absolute zero, or nearly 460°F. In order to include the energy brought to the system by temperatures outside a laboratory freezer, the team's simulations incorporate a Monte Carlo method known as Wang-Landau, which guides the LSMS application to explore electron behavior at a variety of temperatures.
According to Eisenbach, the two methods are ideally suited to massively parallel computing systems. They scale linearly, meaning the need for computing resources grows at the same rate as the size of the system being simulated, and LSMS can be scaled to very large materials systems by assigning one atom to each processing core.
Page: 1 of 2(Digg, Technorati, more)
There was a new energy at this year's TeraGrid '09 conference thanks to an outstanding turnout for the student program. Thanks to support from the National Science Foundation, more than 100 high school, undergraduate and graduate students were able to participate in the conference.
Read More...
Paul Avery, a recognized leader in advanced grid and networking for science, delivered the first keynote address at the recent TeraGrid '09 conference in Arlington, Virginia. A professor of physics at the University of Florida, Avery is co-principal investigator and founding member of the Open Science Grid (OSG). Avery talked about the history of OSG, some of the projects that leverage its resources, and OSG's relationship with TeraGrid.
Read More...
Before he even took the podium, Ed Seidel was one of the buzz makers at the TeraGrid '09 conference. The day before his keynote, it was announced that he was stepping in as acting assistant director of the National Science Foundation's math and physical sciences directorate. For his talk at the conference, however, Seidel focused on the issues and efforts within his home at NSF, the Office of Cyberinfrastructure.
Read More...
Jul 09 | Engineer Live | The demand for computational tools to underpin the 3D seismic interpretation process has never been more apparent. Read more...
Jul 08 | EE Times | Unemployment for U.S. engineers has reached record levels, according to government figures. Read more...
Jul 08 | Network World | Global spending for 2009 projected to drop 6 percent, for a total of $3.2 trillion. Read more...
Jul 08 | Linux Magazine | Portability or efficiency? Neither is guaranteed when writing explicit parallel code. Read more...
Jul 07 | Ars Technica | Japanese company builds custom ASIC to accelerate real-time ray traced rendering for the auto industry. Read more...
Apr 14 | | Many HPC IT departments are feeling the rising pressure to deliver more capacity computing and performance while trying to reduce the total cost of ownership. This white paper discusses how an environmentally-friendly and open-standards HPC building block based computing system using flexible interconnect options helps address capacity computing needs.
Source: Addison Snell, GM/VP, Tabor Research; sponsored by Dell
Many organizations that could benefit from the use of HPC clusters find that it is complicated to get the systems up and running because of limited IT resources or the complexities of the clusters themselves. Learn how the Intel Cluster Ready program, for which Dell was an original partner, seeks to address this challenge for entry level and mid-range HPC users.
BlueArc's Titan architecture represents an evolutionary step in file servers by creating a hardware-based file system that can scale bandwidth, IOPS, and overall data capacity well beyond conventional software-based devices. With its ability to virtualize a massive storage pool of up to four usable petabytes of tiered storage, Titan can scale with growing data requirements, offering a competitive advantage for businesses, researchers, or other enterprises seeking to better manage data growth while still ensuring optimal performance.
Sun Studio Compilers and Tools and Sun HPC ClusterTools allow you to create high performance parallel applications for OpenSolaris, Solaris and Linux. Sun Studio Express 11/08 includes MPI performance analysis capabilities and full OpenMP 3.0 compiler support. Learn about all this and the latest in Sun HPC ClusterTools 8.1.