The Leading Source for Global News and Information Covering the Ecosystem of High Productivity Computing
September 15, 2006
"Lightning" is the name of Iowa State University's newest high performance computer. The new machine's 376 processors can handle 1.8 trillion calculations per second and the computer can store nearly 28 trillion bytes of data. Lightning was built using AMD 280 Opteron processors and the high performance InfiniPath HTX communication network from Pathscale.
"The machine is so fast that a month of calculations can be done in less than two hours," said Glenn Luecke, director of Iowa State's High Performance Computing Partnership and a professor of mathematics. "To successfully compete for research grants and to perform the research required for existing research grants, computational faculty must have access to these very fast machines."
Lightning was purchased from Atipa Technologies for $480,000 with money from the Office of the Vice President for Research and Economic Development, the Office of the Chief Information Officer, and faculty who pooled some of their research funding. Iowa State researchers have been using the computer since mid-August.
This is the second high-powered computer Iowa State has put to work this year. In late January, Iowa State researchers turned on CyBlue, an IBM Blue Gene/L supercomputer capable of 5.7 trillion calculations per second and storing 11 trillion bytes of data. CyBlue was 99th on the most recent rankings of the world's 500 most powerful supercomputers.
James Davis, Iowa State's chief information officer, said the two high-powered computers have different capabilities and so the machines complement each other.
Eric Cochran, an assistant professor of chemical and biological engineering, is researching the properties of certain polymers characterized by self-assembly processes. It's work that could help create the next generation of computer chips. And it's work that requires studying features at the nanoscale, or at one billionth of a meter. One way to do that is to build complex 3-D computer simulations.
Before the new high performance computer arrived on campus, Cochran said he had to work on computer clusters at the University of California, Santa Barbara, where he did his postdoctoral research. But now, "The facility here is orders of magnitude above and beyond what I was using," he said. "I now have everything I need for computing."
Francine Battaglia, an Iowa State associate professor of mechanical engineering and director of the Center for Building Energy Research, is working to understand chemical reactions as gases and solids flow together. She, for example, is studying the gasification of coal or switchgrass to see how they could be burned more efficiently.
Computer simulations for her research can take weeks or even a month to solve, Battaglia said. She estimated the new high performance computer can handle the same calculations in about half the time. That not only makes her research more productive, it gives her the ability to solve bigger problems. She said the result is more accurate solutions.
-----
Source: Iowa State University
(Digg, Technorati, more)
Petascale Computing: Algorithms and Applications, edited by David A. Bader, is the first book in CRC's Computational Science Series, edited by Horst Simon. Although the book is a collection of papers, Bader has done an excellent job of creating a compilation that holds together and covers a broad topic very well.
Read More...
Cilk++ used in parallelization of the FP-tree algorithm for pattern mining; Istanbul benchmark results posted; and the latest on the NVIDIA Tesla shortage. John West recaps those stories and more in our weekly wrap-up.
Read More...
Last week's International Supercomputing Conference (ISC'09) was a convenient excuse for vendors to announce a raft of new products, but three, in particular, stood out.
Read More...
Jul 01 | GenomeWeb Daily News | The popularity of cloud computing in the life sciences community was on full display at April's Bio-IT World conference. Read more...
Jul 01 | Linux Magazine | How can getting to the ocean help with HPC computing? Read more...
Jun 29 | GCN.com | Agency issues RFI for "Ubiquitous High Performance Computing" systems. Read more...
Jun 29 | Computerworld | The bottom of the TOP500 reveals the coming revolution in truly accessible high-end computing. Read more...
Jun 18 | EE Times | Parallel software also takes spotlight at Stanford confab. Read more...
Apr 14 | | Many HPC IT departments are feeling the rising pressure to deliver more capacity computing and performance while trying to reduce the total cost of ownership. This white paper discusses how an environmentally-friendly and open-standards HPC building block based computing system using flexible interconnect options helps address capacity computing needs.
Source: Addison Snell, GM/VP, Tabor Research; sponsored by Dell
Many organizations that could benefit from the use of HPC clusters find that it is complicated to get the systems up and running because of limited IT resources or the complexities of the clusters themselves. Learn how the Intel Cluster Ready program, for which Dell was an original partner, seeks to address this challenge for entry level and mid-range HPC users.
BlueArc's Titan architecture represents an evolutionary step in file servers by creating a hardware-based file system that can scale bandwidth, IOPS, and overall data capacity well beyond conventional software-based devices. With its ability to virtualize a massive storage pool of up to four usable petabytes of tiered storage, Titan can scale with growing data requirements, offering a competitive advantage for businesses, researchers, or other enterprises seeking to better manage data growth while still ensuring optimal performance.
Sun Studio Compilers and Tools and Sun HPC ClusterTools allow you to create high performance parallel applications for OpenSolaris, Solaris and Linux. Sun Studio Express 11/08 includes MPI performance analysis capabilities and full OpenMP 3.0 compiler support. Learn about all this and the latest in Sun HPC ClusterTools 8.1.