Since 1986 - Covering the Fastest Computers in the World and the People Who Run Them

Language Flags

Tag: genomics

Study Points to Big Bang of Bird Evolution

Dec 15, 2014 |

An international consortium comprised of hundreds of scientists from around the world has successfully decoded the avian genome. The multi-year project harnessed the power of nine supercomputers and 400 years of computing time to sequence, assemble and compare the full genomes of 48 bird species, shedding light on a wide range of avian evolutionary diversity. The Read more…

Complex Wheat Genome Nearly Cracked

Dec 4, 2014 |

One of the highlights of SC14 was a focus on how HPC is expanding out of its roots and cropping up in more and more places. One of the more interesting use cases to take center stage at this year’s event in New Orleans was the significance of HPC to understanding and decoding the bread Read more…

Cloud Gives DNA Compiler Wings

Aug 5, 2014 |

Imagine being able to turn bacteria into molecular factories, capable of producing everything from earth-friendly biofuels to personalized medicines? This is the promise of synthetic biology, which has made remarkable advances over the last decade, taking tools and concepts from physics, engineering and computer science to design new biological systems. One of the foremost researchers Read more…

‘Sailfish’ Accelerates Gene Expression Analysis

Apr 24, 2014 |

“Sailfish” is a new computational method out of Carnegie-Mellon University and the University of Maryland that speeds up RNA sequencing analysis by a factor of 20 or greater. The method – dubbed Sailfish after the super-speedy fish – provides quantification estimates of gene expression much faster than previous methods such that a job that once Read more…

Illumina Establishes $1,000 Genome

Jan 15, 2014 |

Genomics moves rapidly. Not long after the first human genome was sequenced in 2003 at a cost of $3 billion, the biotech industry set its sights on the $1,000 genome mark. Realizing this vision has been a primary goal of the sequencing community for nearly a decade, and now it seems that the $1,000 genome Read more…

Improved Genome Portal Benefits Users

Jan 8, 2014 |

The DOE Joint Genome Institute (JGI), a national user facility that supports the managing and analysis of complex genomic data, has been working for two years to improve its user interface and infrastructure. The Genome Portal (http://genome.jgi.doe.gov), the massive genomic database and data management system operated by the JGI, now boasts significant upgrades to support efficient Read more…

Supercomputing Bolsters Agricultural Science in India

Dec 17, 2013 |

A paradigm shift is occurring within the agricultural sciences, owing to the genomics-based data explosion and concurrent computational advances. In India, leaders are intent on furthering the burgeoning genomic supercomputing discipline through the establishment of a supercomputing center and a nationwide grid to support bioinformatics and agricultural science. A recent article in BioSpectrum explores this transformation, noting that data-intensive nature Read more…

Genomics Advances in Africa

Dec 12, 2013 |

Scientists at Stellenbosch University (SU) in Africa have completed the first sequencing of the human genome on that continent with the help of a 5500xl Next Generation Sequencer, nicknamed MegaMind. This achievement was featured in a recent issue of Quest: Science for South Africa, a popular science magazine, published each quarter by the Academy of Read more…

Biotech Vendors Compute to Compete

Aug 28, 2013 |

Biotech companies are reaping the benefits of more accessible high-performance computing tools. The ability to compress weeks of modeling into days or hours is improving outcomes and boosting time to market.

Coding Bioinformatics into the Cloud

Jul 24, 2013 |

A team comprised primarily of researchers from the Technical University of Munich published a paper this month on a system that will offer cloud functionality to a bioinformatics toolset that covers high performance applications.

SC14 Virtual Booth Tours

AMD SC14 video AMD Virtual Booth Tour @ SC14
Click to Play Video
Cray SC14 video Cray Virtual Booth Tour @ SC14
Click to Play Video
Datasite SC14 video DataSite and RedLine @ SC14
Click to Play Video
HP SC14 video HP Virtual Booth Tour @ SC14
Click to Play Video
IBM DCS3860 and Elastic Storage @ SC14 video IBM DCS3860 and Elastic Storage @ SC14
Click to Play Video
IBM Flash Storage
@ SC14 video IBM Flash Storage @ SC14  
Click to Play Video
IBM Platform @ SC14 video IBM Platform @ SC14
Click to Play Video
IBM Power Big Data SC14 video IBM Power Big Data @ SC14
Click to Play Video
Intel SC14 video Intel Virtual Booth Tour @ SC14
Click to Play Video
Lenovo SC14 video Lenovo Virtual Booth Tour @ SC14
Click to Play Video
Mellanox SC14 video Mellanox Virtual Booth Tour @ SC14
Click to Play Video
Panasas SC14 video Panasas Virtual Booth Tour @ SC14
Click to Play Video
Quanta SC14 video Quanta Virtual Booth Tour @ SC14
Click to Play Video
Seagate SC14 video Seagate Virtual Booth Tour @ SC14
Click to Play Video
Supermicro SC14 video Supermicro Virtual Booth Tour @ SC14
Click to Play Video