New HPC Platform Aims For Balance

By Michael Feldman

October 20, 2006

This week, Silicon Valley startup PANTA Systems unveiled its new server platform called PANTAmatrix. It is an x86-based platform that represents one of the new breed of servers that focuses on I/O performance and SMP configurability. It allows users to dynamically allocate I/O and computational resources across the cluster. A single PANTAmatrix system can support up to 9,000 processors as well as petabytes of storage.

The PANTAmatrix platform is based on an 8U chassis containing a mixture of vertical-oriented blades (or modules). Up to four of these 8U enclosures can go into a single rack. The architecture employs an integrated InfiniBand fabric to connect compute nodes with a shared I/O infrastructure. A single chassis can support two InfiniBand switch modules and up to eight AMD Opteron-based compute modules. Two compute modules can be paired together dynamically via a HyperTransport interconnect to support larger SMP nodes. Since an Opteron module may contain either two or four sockets (containing dual-core processors), nodes can configured to be 4-way, 8-way, or 16-way. Each compute module can hold up to 64 GB of memory, so a maximum of 128 GB per SMP node is possible. Interconnect bandwidth is allocated independently of the SMP size, with up to 12 GB/sec of bandwidth provided to a single node.

Alternatively, an Opteron-based compute module can be connected — again via HyperTransport — to an NVIDIA-based visualization module to produce a CPU-GPU node. Each visualization module contains 2 NVIDIA GPUs. Within an enclosure, up to four visualization modules can be accommodated. The inclusion of commodity graphics processing represents one of the first x86 server systems with this capability. The GPU can be used for either traditional visualization functions or application acceleration. More about this later.

PANTA also offers a 3U storage enclosure, providing up to three terabytes of capacity, connected via the InfiniBand fabric. It provides 800 MB/sec of sustained transfer rate per disk array. The high bandwidth is enabled by the PANTA storage agent using RDMA protocols for OS bypass.

Like the founders of Fabric7 and Liquid Computing — companies offering similar types of architectures — the folks at PANTA Systems are attempting to address the unbalanced nature of traditional x86 cluster platforms, where I/O and memory starvation can severely limit performance. This is especially true for data-intensive applications that require large memory footprints such as you would find in real-time analytics, financial services, seismic simulation, data warehousing and a variety of high performance technical computing applications.

The pursuit of this market space places PANTA in the growing legion of x86 server vendors that are challenging the domination of the big Linux machines. The PANTA systems aren't low-end platforms. They start at around $50K. The competition tends to be machines like HP SuperDomes, IBM Power5/Power6 servers, Sun UltraSPARC-based Sun Fire 15K/25K systems, and SGI Altix platforms. But PANTA thinks it can differentiate itself from the other high-end platform OEMs with superior system design.

Tung Nguyen, PANTA Systems founder and CTO, says data starvation is the key bottleneck today. He reminds us that back in the 1990s everyone was riding on the wave of the microprocessor. With the focus on processor performance, people forgot how to build balanced systems. While CPU improvement has been advancing at around 60 percent per year, memory and I/O performance have only improved 5 to 10 percent. Multi-core processors exacerbate the problem even more. So the challenge is how to feed all the compute engines. Nguyen says the solution is to add a lot more data pipes, while providing the ability to slice up computational resources into various sized SMP nodes and be able to allocate the I/O bandwidth independently across those nodes.

“Computer design is essentially about plumbing. I learned that from Seymour Cray in the '80s when I worked for him,” says Nguyen, who worked at Cray from 1980 to 1987. “With six InfiniBand links coming out of one of our [switch modules] we have more plumbing than anybody else in the world. We have 3X the plumbing that you would get from IBM BladeCenter, HP blades, or any of those high-end systems that other people have. The maximum you see is a couple of InfiniBand links. We have six — and believe me, we use all of them.”

According to Nguyen, they've spent a lot of time with high-end HPC commercial customers, such as you would find on Wall Street. The incumbent hardware providers are usually IBM or HP, so PANTA has to prove themselves in that kind of environment. He says they're not trying to compete in a dollar/flop kind of game. Since PANTA uses commodity technology, large vendors like IBM and HP and even smaller companies like Rackable and Linux Networx can buy Opterons cheaper than PANTA can because of volume purchases. They have to use their advantage in I/O performance, configurability and overall system design to compete with the more established players.

“So if we run into a dollar/flop situation, we cannot win,” explains Nguyen.

But actually the game changes somewhat when you're talking about GPUs says Nguyen. Today's high-end GPUs yield about 200 gigaflops of 32-bit floating point computing power. With the recent interest in stream computing for computational acceleration, and companies like PeakStream providing software support for such systems, the calculation is changing. So now PANTA is starting to believe that they can present a compelling dollar/flop story with their GPU modules.

Nguyen says that in the 1980s, Cray changed the face of computing with its early vector architectures. Since then, the industry has been focused on clustering architectures; there have been no real breakthroughs. But Nguyen believes that coupling GPUs with general-purpose processors is going to rearrange the landscape of computing.

“In the last two or three months, there's been a wave of publicity about stream computing — AMD's acquisition of ATI and PeakStream's announcement [of its stream computing platform],” observes Nguyen. “One of the things about us that is not well known about (since we've been in stealth mode for quite awhile) is that we've been shipping systems with integrated GPUs since early 2005.”

The University of North Carolina chose PANTA gear because the high I/O throughput and NVIDIA GPUs met the requirements of their biomedical simulation and analysis applications. Currently PANTA only supports NVIDIA devices, but since AMD is one of PANTA's key partners, they are starting to develop a relationship with ATI. The company appears to be planning for a more comprehensive offering of GPU technology.

“There's an enormous amount of compute power in one of these GPUs,” says Nguyen. “I believe what [NVIDIA and ATI] are doing is very profound. In the near future you will probably be looking at close to a teraflop, in single precision, and maybe 200 to 300 gigaflops in double precision performance.”

“This is just the beginning for us,” concludes Nguyen. “Our next generation will arrive in six or nine months. We will improve the I/O capability and bandwidth of the system by a factor of four. That will enable us to build the kind of system that can harness the sustained computing power that is offered by technologies like GPUs.”

Subscribe to HPCwire's Weekly Update!

Be the most informed person in the room! Stay ahead of the tech trends with industry updates delivered to you every week!

2024 Winter Classic: Meet Team Morehouse

April 17, 2024

Morehouse College? The university is well-known for their long list of illustrious graduates, the rigor of their academics, and the quality of the instruction. They were one of the first schools to sign up for the Winter Read more…

MLCommons Launches New AI Safety Benchmark Initiative

April 16, 2024

MLCommons, organizer of the popular MLPerf benchmarking exercises (training and inference), is starting a new effort to benchmark AI Safety, one of the most pressing needs and hurdles to widespread AI adoption. The sudde Read more…

Quantinuum Reports 99.9% 2-Qubit Gate Fidelity, Caps Eventful 2 Months

April 16, 2024

March and April have been good months for Quantinuum, which today released a blog announcing the ion trap quantum computer specialist has achieved a 99.9% (three nines) two-qubit gate fidelity on its H1 system. The lates Read more…

Mystery Solved: Intel’s Former HPC Chief Now Running Software Engineering Group 

April 15, 2024

Last year, Jeff McVeigh, Intel's readily available leader of the high-performance computing group, suddenly went silent, with no interviews granted or appearances at press conferences.  It led to questions -- what's Read more…

Exciting Updates From Stanford HAI’s Seventh Annual AI Index Report

April 15, 2024

As the AI revolution marches on, it is vital to continually reassess how this technology is reshaping our world. To that end, researchers at Stanford’s Institute for Human-Centered AI (HAI) put out a yearly report to t Read more…

Crossing the Quantum Threshold: The Path to 10,000 Qubits

April 15, 2024

Editor’s Note: Why do qubit count and quality matter? What’s the difference between physical qubits and logical qubits? Quantum computer vendors toss these terms and numbers around as indicators of the strengths of t Read more…

MLCommons Launches New AI Safety Benchmark Initiative

April 16, 2024

MLCommons, organizer of the popular MLPerf benchmarking exercises (training and inference), is starting a new effort to benchmark AI Safety, one of the most pre Read more…

Exciting Updates From Stanford HAI’s Seventh Annual AI Index Report

April 15, 2024

As the AI revolution marches on, it is vital to continually reassess how this technology is reshaping our world. To that end, researchers at Stanford’s Instit Read more…

Intel’s Vision Advantage: Chips Are Available Off-the-Shelf

April 11, 2024

The chip market is facing a crisis: chip development is now concentrated in the hands of the few. A confluence of events this week reminded us how few chips Read more…

The VC View: Quantonation’s Deep Dive into Funding Quantum Start-ups

April 11, 2024

Yesterday Quantonation — which promotes itself as a one-of-a-kind venture capital (VC) company specializing in quantum science and deep physics  — announce Read more…

Nvidia’s GTC Is the New Intel IDF

April 9, 2024

After many years, Nvidia's GPU Technology Conference (GTC) was back in person and has become the conference for those who care about semiconductors and AI. I Read more…

Google Announces Homegrown ARM-based CPUs 

April 9, 2024

Google sprang a surprise at the ongoing Google Next Cloud conference by introducing its own ARM-based CPU called Axion, which will be offered to customers in it Read more…

Computational Chemistry Needs To Be Sustainable, Too

April 8, 2024

A diverse group of computational chemists is encouraging the research community to embrace a sustainable software ecosystem. That's the message behind a recent Read more…

Hyperion Research: Eleven HPC Predictions for 2024

April 4, 2024

HPCwire is happy to announce a new series with Hyperion Research  - a fact-based market research firm focusing on the HPC market. In addition to providing mark Read more…

Nvidia H100: Are 550,000 GPUs Enough for This Year?

August 17, 2023

The GPU Squeeze continues to place a premium on Nvidia H100 GPUs. In a recent Financial Times article, Nvidia reports that it expects to ship 550,000 of its lat Read more…

Synopsys Eats Ansys: Does HPC Get Indigestion?

February 8, 2024

Recently, it was announced that Synopsys is buying HPC tool developer Ansys. Started in Pittsburgh, Pa., in 1970 as Swanson Analysis Systems, Inc. (SASI) by John Swanson (and eventually renamed), Ansys serves the CAE (Computer Aided Engineering)/multiphysics engineering simulation market. Read more…

Intel’s Server and PC Chip Development Will Blur After 2025

January 15, 2024

Intel's dealing with much more than chip rivals breathing down its neck; it is simultaneously integrating a bevy of new technologies such as chiplets, artificia Read more…

Choosing the Right GPU for LLM Inference and Training

December 11, 2023

Accelerating the training and inference processes of deep learning models is crucial for unleashing their true potential and NVIDIA GPUs have emerged as a game- Read more…

Baidu Exits Quantum, Closely Following Alibaba’s Earlier Move

January 5, 2024

Reuters reported this week that Baidu, China’s giant e-commerce and services provider, is exiting the quantum computing development arena. Reuters reported � Read more…

Comparing NVIDIA A100 and NVIDIA L40S: Which GPU is Ideal for AI and Graphics-Intensive Workloads?

October 30, 2023

With long lead times for the NVIDIA H100 and A100 GPUs, many organizations are looking at the new NVIDIA L40S GPU, which it’s a new GPU optimized for AI and g Read more…

Shutterstock 1179408610

Google Addresses the Mysteries of Its Hypercomputer 

December 28, 2023

When Google launched its Hypercomputer earlier this month (December 2023), the first reaction was, "Say what?" It turns out that the Hypercomputer is Google's t Read more…

AMD MI3000A

How AMD May Get Across the CUDA Moat

October 5, 2023

When discussing GenAI, the term "GPU" almost always enters the conversation and the topic often moves toward performance and access. Interestingly, the word "GPU" is assumed to mean "Nvidia" products. (As an aside, the popular Nvidia hardware used in GenAI are not technically... Read more…

Leading Solution Providers

Contributors

Shutterstock 1606064203

Meta’s Zuckerberg Puts Its AI Future in the Hands of 600,000 GPUs

January 25, 2024

In under two minutes, Meta's CEO, Mark Zuckerberg, laid out the company's AI plans, which included a plan to build an artificial intelligence system with the eq Read more…

DoD Takes a Long View of Quantum Computing

December 19, 2023

Given the large sums tied to expensive weapon systems – think $100-million-plus per F-35 fighter – it’s easy to forget the U.S. Department of Defense is a Read more…

China Is All In on a RISC-V Future

January 8, 2024

The state of RISC-V in China was discussed in a recent report released by the Jamestown Foundation, a Washington, D.C.-based think tank. The report, entitled "E Read more…

Shutterstock 1285747942

AMD’s Horsepower-packed MI300X GPU Beats Nvidia’s Upcoming H200

December 7, 2023

AMD and Nvidia are locked in an AI performance battle – much like the gaming GPU performance clash the companies have waged for decades. AMD has claimed it Read more…

Nvidia’s New Blackwell GPU Can Train AI Models with Trillions of Parameters

March 18, 2024

Nvidia's latest and fastest GPU, codenamed Blackwell, is here and will underpin the company's AI plans this year. The chip offers performance improvements from Read more…

Eyes on the Quantum Prize – D-Wave Says its Time is Now

January 30, 2024

Early quantum computing pioneer D-Wave again asserted – that at least for D-Wave – the commercial quantum era has begun. Speaking at its first in-person Ana Read more…

GenAI Having Major Impact on Data Culture, Survey Says

February 21, 2024

While 2023 was the year of GenAI, the adoption rates for GenAI did not match expectations. Most organizations are continuing to invest in GenAI but are yet to Read more…

Intel’s Xeon General Manager Talks about Server Chips 

January 2, 2024

Intel is talking data-center growth and is done digging graves for its dead enterprise products, including GPUs, storage, and networking products, which fell to Read more…

  • arrow
  • Click Here for More Headlines
  • arrow
HPCwire