Parallel File System OrangeFS Starts to Build a Following

By Nicole Hemsoth

November 18, 2011

If you thought Lustre and GPFS were your only two choices for a high performance, scalable parallel file system, then you’ve probably never heard of OrangeFS. Described as a branch of the open source Parallel Virtual File System (PVFS), OrangeFS has been taken under the wing of Omnibond LLC, which is now providing commercial support for the software.

At SC11, there was a BoF session that discussed recent developments in OrangeFS and its future direction. We caught up with two of the session leaders, Walt Ligon, founding PVFS/OrangeFS Architect and Associate Professor of Electrical and Computer Engineering, and Boyd Wilson executive director at Omnibond, as well as Jim Bottum, CIO and vice provost for Computing & Information Technology at Clemson University, to talk about the file system’s unique attributes and some of its real-world use cases.

HPCwire: What is OrangeFS and what problem is it trying to solve that is not being addressed by other parallel file systems like Lustre and GPFS?

Walt Ligon: OrangeFS is a next-generation parallel file system based on PVFS for compute and storage clusters of the future. Its original charter — to complement high-performance computing for cutting-edge research in academic and government initiatives — is fast expanding into a versatile array of real-world applications.

The big benefit of OrangeFS over many similar parallel file systems comes down to two issues. First, it is one of the best performing parallel file systems available. It is based on the PVFS architecture, which is powerful and modular. This has allowed the design to evolve to incorporate distributed directories, optimized requests, a wide variety of interfaces and features. It is well designed.

Second, it is an extremely easy file system to build, install, get and keep running. This is hard to quantify, so we encourage anyone to download the tarball and try it. As another point of reference, PVFS has been used in dozens of educational, experimental, and research settings and formed the basis of many graduate theses. It is a very usable file system.

PVFS went through two generations as an experimental-turned-production file system. OrangeFS has been hardened through several years of development, testing, and support by a professional development team. Now it is being deployed for a range of applications with commercial support, though it is still open source.

A detailed list of features that are unique to OrangeFS is:

  • Unique object-based file data transfer, allowing clients to work on objects without the need to handle underlying storage details, such as data blocks
  • Unified data/metadata servers
  • Distribution of metadata across storage servers
  • Distribution of directory entries
  • Diverse Client Access Methods: Posix, MPI, Linux VFS, FUSE, Windows, WebDAV, S3, and REST interfaces.
  • Ability to configure storage parameters by directory or file, including stripe size, number of servers, replication, security
  • Virtualized storage over any Linux file system as underlying local storage on each connected server

HPCwire: What is the precise relationship between PVFS and OrangeFS?

Ligon: OrangeFS is the next evolution of PVFS, adding commercial grade services in addition to new features and future development. For many years PVFS development focused primarily on a few large scientific workloads. At the same time members of the community used PVFS as a research tool to experiment with different aspects of parallel file system design and implementation. OrangeFS is broadening that scope to include production quality service for a wider range of data intensive application areas. This has led to re-evaluating a number of assumptions that were valid for PVFS but may, or may not, be appropriate for these other workloads. Thus a new generation of development is under way to address these new scenarios.

Boyd Wilson: PVFS was supported by a small group of exceptional developers that were closely associated with the scientific applications that it was intended for. OrangeFS, in contrast is looking to attract a wide range of users, thus Omnibond has stepped up to provide commercial grade support and development practices. Just the same, OrangeFS is still 100% open-source, there are no commercial versions of the code, we intend to support the PVFS community as we always have. We continue to support the PVFS mailing lists and interact with people using OrangeFS as a development platform. The benefit to those customers who do pay for support is priority access to a professional support staff with experience and resources for supporting the software as well as access to the developers in order to guide improvements and new features. Omnibond sees this latter point as a major opportunity to partner with its customers in developing vertical product lines using OrangeFS as a base. No other parallel file system is offered with this philosophy.

HPCwire: How does OrangeFS differ from other parallel file systems? What do you see as its main advantages?

Wilson: OrangeFS was designed with a unified server that supports both distributed metadata and distributed file data. The PVFS architecture is modular, making it easy to develop and support new networks and new storage devices, to implement new requests to optimize specific operations, and to add new features. OrangeFS is 100 percent open source, it was developed by a diverse community of government, academic, and industry. There are no commercial or “pro” versions, every new development is returned to the community. The community is still encouraged to participate in the development.

Configurable features at the system, directory and file levels including striping parameters, distribution methods, replication support, security, etc. The PVFS protocol provides a rich set of operations that support distributed operations and is easily extendable. OrangeFS provides diverse client access methods including MPI-IO, Posix-like methods, Linux VFS, FUSE and Windows support, coming soon will be WebDAV, S3, REST.

OrangeFS supports standard out-of-the-box Linux kernels. Server and client code are implemented at the user level. The Linux kernel module used for VFS support is very simple and does not require kernel patches. OrangeFS is very easy to build, install, and begin operating, and very easy to keep operating.

HPCwire: What types of users would be most interested in the technology? Are there use cases out there in the wild?

Jim Bottum: HPC users on all size parallel systems can make use of OrangeFS. PVFS was initially rolled out to the very high-end computing community and generally very large I/O. Clemson University adopted PVFS, which was initially developed by Clemson faculty and students, as it was beginning to roll out HPC campus wide in 2007.

As the Clemson staff tuned PVFS for its user community both on campus and around the state, it was tuned work equally as well on smaller I/O workloads. Users with rendering and video server farms, would be ideal, as would financial and other data analytics firms. We have been working with users in the oil and gas industry and a broad range of science and engineering.

We have a large corporate client that uses OrangeFS extensively for data mining. They have over 700 distinct OrangeFS file systems they are operating. Here at Clemson we have a diverse range of users including bioinformatics, digital production, astrophysics, several humanities areas and cloud computing.

Other Universities and Research labs are migrating to OrangeFS from PVFS2 and have commented on how it has solved several of their problems in the past. The PVFS2 users list and community has over 260 members and file system research around the globe is accomplished with PVFS2, now OrangeFS as its base.

HPCwire: What types of support and services does Omnibond are offer for OrangeFS and what’s the pricing model?

Wilson: Commercial grade services provide what customers would expect from commercial software but better. When you pay for a typical software license you get access to the software, and support may be extra. With OrangeFS and Omnibond you have the software; when you buy a subscription you get access to support but it also pays for future development. With your subscription you have a say in what features you would like worked on in the future.

For commercial customers a 5-storage-server bundle starts at $25,000 and as quantities increase the price per storage server decreases. We also offer custom pricing for cloud customers who need more scalable options

HPCwire: What does the roadmap for OrangeFS look like for the next couple of years?

Wilson: We have just released several new client interfaces and a new distributed directories implementation. Distributed directories allows directory entries for a single directory to be spread across multiple servers so that multiple client processes can be accessing a very large directory in parallel.

For the last few years we have been developing a new access control implementation based on signed capabilities that will improve the security of OrangeFS significantly with capability based security, which will be the basis of future federated file system access. We hope to be releasing this sometime in the coming months. We have a new Posix-like user interface, and it will include a user-level configurable data cache in the works that should be released soon as well.

Much of our development right now is focused on redundancy, particularly redundant metadata. Today users rely on RAID systems at each server to manage disk failure. In future systems we plan to allow the servers to automatically replicate data and metadata across multiple servers. As part of this we are moving to a more flexible architecture for managing servers in a distributed environment, including not only replication but tiered migration and a much more dynamic object model.

Similar efforts are under way within many research groups; OrangeFS will hopefully contribute to and benefit from these efforts. Finally, on the long-range radar, there is a project under way including LSU, Indiana, and Clemson, to develop a new object-oriented IO model called PXFS, using OrangeFS as a platform and targeting Exascale systems.

HPCwire: If someone wanted to give OrangeFS a try, how would they go about it?

Ligon: They can download a tarball from the website or download our latest changes from our CVS repository. Instructions on how to install the system are found in the documentation tab of our site.

OrangeFS builds using autoconf, make, and gcc from GNU. Most of the code will build and run on any UNIX-based system, except the VFS module, which is Linux-specific. An experimental FUSE module is included. The main dependencies are BerkeleyDB and the proper kernel headers (if the VFS module is to be built). Some operating systems use an old version of BerkeleyDB. In that case, make sure you install and build a newer OrangeFS version — version 4.8.30 or higher.

OrangeFS can be built for a regular user in virtually any location and tested on one or more machines. Access to the “root” account is required to install and start the VFS module. The file system can be operated without the VFS module, but most users will want to install it.

Subscribe to HPCwire's Weekly Update!

Be the most informed person in the room! Stay ahead of the tech trends with industy updates delivered to you every week!

Russian and American Scientists Achieve 50% Increase in Data Transmission Speed

September 20, 2018

As high-performance computing becomes increasingly data-intensive and the demand for shorter turnaround times grows, data transfer speed becomes an ever more important bottleneck. Now, in an article published in IEEE Tra Read more…

By Oliver Peckham

IBM to Brand Rescale’s HPC-in-Cloud Platform

September 20, 2018

HPC (or big compute)-in-the-cloud platform provider Rescale has formalized the work it’s been doing in partnership with public cloud vendors by announcing its Powered by Rescale program – with IBM as its first named Read more…

By Doug Black

Democratization of HPC Part 1: Simulation Sheds Light on Building Dispute

September 20, 2018

This is the first of three articles demonstrating the growing acceptance of High Performance Computing especially in new user communities and application areas. Major reasons for this trend are the ongoing improvements i Read more…

By Wolfgang Gentzsch

HPE Extreme Performance Solutions

Introducing the First Integrated System Management Software for HPC Clusters from HPE

How do you manage your complex, growing cluster environments? Answer that big challenge with the new HPC cluster management solution: HPE Performance Cluster Manager. Read more…

IBM Accelerated Insights

Clouds Over the Ocean – a Healthcare Perspective

Advances in precision medicine, genomics, and imaging; the widespread adoption of electronic health records; and the proliferation of medical Internet of Things (IoT) and mobile devices are resulting in an explosion of structured and unstructured healthcare-related data. Read more…

Summit Supercomputer is Already Making its Mark on Science

September 20, 2018

Summit, now the fastest supercomputer in the world, is quickly making its mark in science – five of the six finalists just announced for the prestigious 2018 Gordon Bell Prize used Summit in their work. That’s impres Read more…

By John Russell

Summit Supercomputer is Already Making its Mark on Science

September 20, 2018

Summit, now the fastest supercomputer in the world, is quickly making its mark in science – five of the six finalists just announced for the prestigious 2018 Read more…

By John Russell

House Passes $1.275B National Quantum Initiative

September 17, 2018

Last Thursday the U.S. House of Representatives passed the National Quantum Initiative Act (NQIA) intended to accelerate quantum computing research and developm Read more…

By John Russell

Nvidia Accelerates AI Inference in the Datacenter with T4 GPU

September 14, 2018

Nvidia is upping its game for AI inference in the datacenter with a new platform consisting of an inference accelerator chip--the new Turing-based Tesla T4 GPU- Read more…

By George Leopold

DeepSense Combines HPC and AI to Bolster Canada’s Ocean Economy

September 13, 2018

We often hear scientists say that we know less than 10 percent of the life of the oceans. This week, IBM and a group of Canadian industry and government partner Read more…

By Tiffany Trader

Rigetti (and Others) Pursuit of Quantum Advantage

September 11, 2018

Remember ‘quantum supremacy’, the much-touted but little-loved idea that the age of quantum computing would be signaled when quantum computers could tackle Read more…

By John Russell

How FPGAs Accelerate Financial Services Workloads

September 11, 2018

While FSI companies are unlikely, for competitive reasons, to disclose their FPGA strategies, James Reinders offers insights into the case for FPGAs as accelerators for FSI by discussing performance, power, size, latency, jitter and inline processing. Read more…

By James Reinders

Update from Gregory Kurtzer on Singularity’s Push into FS and the Enterprise

September 11, 2018

Container technology is hardly new but it has undergone rapid evolution in the HPC space in recent years to accommodate traditional science workloads and HPC systems requirements. While Docker containers continue to dominate in the enterprise, other variants are becoming important and one alternative with distinctly HPC roots – Singularity – is making an enterprise push targeting advanced scale workload inclusive of HPC. Read more…

By John Russell

At HPC on Wall Street: AI-as-a-Service Accelerates AI Journeys

September 10, 2018

AIaaS – artificial intelligence-as-a-service – is the technology discipline that eases enterprise entry into the mysteries of the AI journey while lowering Read more…

By Doug Black

TACC Wins Next NSF-funded Major Supercomputer

July 30, 2018

The Texas Advanced Computing Center (TACC) has won the next NSF-funded big supercomputer beating out rivals including the National Center for Supercomputing Ap Read more…

By John Russell

IBM at Hot Chips: What’s Next for Power

August 23, 2018

With processor, memory and networking technologies all racing to fill in for an ailing Moore’s law, the era of the heterogeneous datacenter is well underway, Read more…

By Tiffany Trader

Requiem for a Phi: Knights Landing Discontinued

July 25, 2018

On Monday, Intel made public its end of life strategy for the Knights Landing "KNL" Phi product set. The announcement makes official what has already been wide Read more…

By Tiffany Trader

CERN Project Sees Orders-of-Magnitude Speedup with AI Approach

August 14, 2018

An award-winning effort at CERN has demonstrated potential to significantly change how the physics based modeling and simulation communities view machine learni Read more…

By Rob Farber

ORNL Summit Supercomputer Is Officially Here

June 8, 2018

Oak Ridge National Laboratory (ORNL) together with IBM and Nvidia celebrated the official unveiling of the Department of Energy (DOE) Summit supercomputer toda Read more…

By Tiffany Trader

New Deep Learning Algorithm Solves Rubik’s Cube

July 25, 2018

Solving (and attempting to solve) Rubik’s Cube has delighted millions of puzzle lovers since 1974 when the cube was invented by Hungarian sculptor and archite Read more…

By John Russell

AMD’s EPYC Road to Redemption in Six Slides

June 21, 2018

A year ago AMD returned to the server market with its EPYC processor line. The earth didn’t tremble but folks took notice. People remember the Opteron fondly Read more…

By John Russell

Sandia to Take Delivery of World’s Largest Arm System

June 18, 2018

While the enterprise remains circumspect on prospects for Arm servers in the datacenter, the leadership HPC community is taking a bolder, brighter view of the x86 server CPU alternative. Amongst current and planned Arm HPC installations – i.e., the innovative Mont-Blanc project, led by Bull/Atos, the 'Isambard’ Cray XC50 going into the University of Bristol, and commitments from both Japan and France among others -- HPE is announcing that it will be supply the United States National Nuclear Security Administration (NNSA) with a 2.3 petaflops peak Arm-based system, named Astra. Read more…

By Tiffany Trader

Leading Solution Providers

SC17 Booth Video Tours Playlist

Altair @ SC17

Altair

AMD @ SC17

AMD

ASRock Rack @ SC17

ASRock Rack

CEJN @ SC17

CEJN

DDN Storage @ SC17

DDN Storage

Huawei @ SC17

Huawei

IBM @ SC17

IBM

IBM Power Systems @ SC17

IBM Power Systems

Intel @ SC17

Intel

Lenovo @ SC17

Lenovo

Mellanox Technologies @ SC17

Mellanox Technologies

Microsoft @ SC17

Microsoft

Penguin Computing @ SC17

Penguin Computing

Pure Storage @ SC17

Pure Storage

Supericro @ SC17

Supericro

Tyan @ SC17

Tyan

Univa @ SC17

Univa

MLPerf – Will New Machine Learning Benchmark Help Propel AI Forward?

May 2, 2018

Let the AI benchmarking wars begin. Today, a diverse group from academia and industry – Google, Baidu, Intel, AMD, Harvard, and Stanford among them – releas Read more…

By John Russell

House Passes $1.275B National Quantum Initiative

September 17, 2018

Last Thursday the U.S. House of Representatives passed the National Quantum Initiative Act (NQIA) intended to accelerate quantum computing research and developm Read more…

By John Russell

D-Wave Breaks New Ground in Quantum Simulation

July 16, 2018

Last Friday D-Wave scientists and colleagues published work in Science which they say represents the first fulfillment of Richard Feynman’s 1982 notion that Read more…

By John Russell

Intel Pledges First Commercial Nervana Product ‘Spring Crest’ in 2019

May 24, 2018

At its AI developer conference in San Francisco yesterday, Intel embraced a holistic approach to AI and showed off a broad AI portfolio that includes Xeon processors, Movidius technologies, FPGAs and Intel’s Nervana Neural Network Processors (NNPs), based on the technology it acquired in 2016. Read more…

By Tiffany Trader

Intel Announces Cooper Lake, Advances AI Strategy

August 9, 2018

Intel's chief datacenter exec Navin Shenoy kicked off the company's Data-Centric Innovation Summit Wednesday, the day-long program devoted to Intel's datacenter Read more…

By Tiffany Trader

TACC’s ‘Frontera’ Supercomputer Expands Horizon for Extreme-Scale Science

August 29, 2018

The National Science Foundation and the Texas Advanced Computing Center announced today that a new system, called Frontera, will overtake Stampede 2 as the fast Read more…

By Tiffany Trader

GPUs Power Five of World’s Top Seven Supercomputers

June 25, 2018

The top 10 echelon of the newly minted Top500 list boasts three powerful new systems with one common engine: the Nvidia Volta V100 general-purpose graphics proc Read more…

By Tiffany Trader

The Machine Learning Hype Cycle and HPC

June 14, 2018

Like many other HPC professionals I’m following the hype cycle around machine learning/deep learning with interest. I subscribe to the view that we’re probably approaching the ‘peak of inflated expectation’ but not quite yet starting the descent into the ‘trough of disillusionment. This still raises the probability that... Read more…

By Dairsie Latimer

  • arrow
  • Click Here for More Headlines
  • arrow
Do NOT follow this link or you will be banned from the site!
Share This