Flatiron Institute to Repurpose SDSC’s Gordon Supercomputer

March 16, 2017

SAN DIEGO, Calif., March 16, 2017 — The San Diego Supercomputer Center (SDSC) at the University of California San Diego and the  Simons Foundation’s Flatiron Institute in New York have reached an agreement under which the majority of SDSC’s data-intensive Gordon supercomputer will be used by Simons for ongoing research following completion of the system’s tenure as a National Science Foundation (NSF) resource on March 31.

Under the agreement, SDSC will provide high-performance computing (HPC) resources and services on Gordon for the Flatiron Institute to conduct computationally-based research in astrophysics, biology, condensed matter physics, materials science, and other domains. The two-year agreement, with an option to renew for a third year, takes effect April 1, 2017.

Under the agreement, the Flatiron Institute will have annual access to at least 90 percent of Gordon’s system capacity. SDSC will retain the rest for use by other organizations including UC San Diego’s Center for Astrophysics & Space Sciences (CASS), as well as SDSC’s OpenTopography project and various projects within the Center for Applied Internet Data Analysis (CAIDA), which is based at SDSC.

“We are delighted that the Simons Foundation has given Gordon a new lease on life after five years of service as a highly sought after XSEDE resource,” said SDSC Director Michael Norman, who also served as the principal investigator for Gordon. “We welcome the Foundation as a new partner and consider this to be a solid testimony regarding Gordon’s data-intensive capabilities and its myriad contributions to advancing scientific discovery.”

“We are excited to have a big boost to the processing capacity for our researchers and to work with the strong team from San Diego,” said Ian Fisk, co-director of the Scientific Computing Core (SCC), which is part of the Flatiron Institute.

David Spergel, director of the Flatiron Institute’s Center for Computational Astrophysics (CCA) said, “CCA researchers will use Gordon both for simulating the evolution and growth of galaxies, as well as for the analysis of large astronomical data sets.  Gordon offers us a powerful platform for attacking these challenging computational problems.”

Simons Array and Simons Observatory

The POLARBEAR project and successor project called The Simons Array, led by UC Berkeley and funded first by the Simons Foundation and then in 2015 by the NSF under a five-year, $5 million grant, will continue to use Gordon as a key resource.

“POLARBEAR and The Simons Array, which will deploy the most powerful CMB (Cosmic Microwave Background) radiation telescope and detector system ever made, are two NSF supported astronomical telescopes that observe CMB, in essence the leftover ‘heat’ from the Big Bang in the form of microwave radiation,” said Brian Keating, a professor of physics at UC San Diego’s Center for Astrophysics & Space Sciences and a co-PI for the POLARBEAR/Simons Array project.

“The POLARBEAR experiment alone collects nearly one gigabyte of data every day that must be analyzed in real time,” added Keating. “This is an intensive process that requires dozens of sophisticated tests to assure the quality of the data. Only by leveraging resources such as Gordon are we be able to continue our legacy of success.”

Gordon also will be used in conjunction with the Simons Observatory, a 5-year $40 million project awarded by the Foundation in May 2016 to a consortium of universities led by UC San Diego, UC Berkeley, Princeton University, and the University of Pennsylvania. In the Simons Observatory, new telescopes will join the existing POLARBEAR/Simons Array and Atacama Cosmology Telescopes to produce an order of magnitude more data than the current POLARBEAR experiment. An all-hands meeting for the new project will take place at SDSC this summer. A video describing the project can be viewed by clicking the image below.

Delivering the Data

The result of a five-year, $20 million NSF grant awarded in late 2009, Gordon entered production in early 2012 as one of the 50 fastest supercom­puters in the world, and the first one to use massive amounts of flash-based memory. That made it many times faster than conventional HPC systems, while having enough bandwidth to help researchers sift through tremendous amounts of data. Gordon also has been a key resource within NSF’s XSEDE (Extreme Science and Engineering Discovery Environment) project. The system will officially end its NSF duties on March 31 following two extensions from the agency.

By the end of February 2017, Gordon had supported research and education by more than 2,000 command-line users and over 7,000 gateway users, primarily through resource allocations from XSEDE.  One of Gordon’s most data-intensive tasks was to rapidly process raw data from almost one billion particle collisions as part of a project to help define the future research agenda for the Large Hadron Collider (LHC). Gordon provided auxiliary computing capacity by processing massive data sets generated by one of the LHC’s two large general-purpose particle detectors used to find the elusive Higgs particle. The around-the-clock data processing run on Gordon was completed in about four weeks’ time, making the data available for analysis several months ahead of schedule.

About the Simons Foundation

The Simons Foundation’s mission is to advance the frontiers of research in mathematics and the basic sciences, supporting discovery-driven scientific research. Co-founded in New York City by Jim and Marilyn Simons, the foundation celebrated its 20th anniversary in 2014. The Foundation makes grants in four program areas: mathematics and physical sciences, life sciences, autism research, and education and outreach. In 2016 the Foundation launched an internal research division called the Flatiron Institute, a multidisciplinary institute focused on computational science.

About SDSC

As an Organized Research Unit of UC San Diego, SDSC is considered a leader in data-intensive computing and cyberinfrastructure, providing resources, services, and expertise to the national research community, including industry and academia. Cyberinfrastructure refers to an accessible, integrated network of computer-based resources and expertise, focused on accelerating scientific inquiry and discovery. SDSC supports hundreds of multidisciplinary programs spanning a wide variety of domains, from earth sciences and biology to astrophysics, bioinformatics, and health IT. SDSC’s petascale Comet supercomputer continues to be a key resource within the National Science Foundation’s XSEDE (Extreme Science and Engineering Discovery Environment) program.


Source: SDSC

Subscribe to HPCwire's Weekly Update!

Be the most informed person in the room! Stay ahead of the tech trends with industy updates delivered to you every week!

University of Chicago Researchers Generate First Computational Model of Entire SARS-CoV-2 Virus

January 15, 2021

Over the course of the last year, many detailed computational models of SARS-CoV-2 have been produced with the help of supercomputers, but those models have largely focused on critical elements of the virus, such as its Read more…

By Oliver Peckham

Pat Gelsinger Returns to Intel as CEO

January 14, 2021

The Intel board of directors has appointed a new CEO. Intel alum Pat Gelsinger is leaving his post as CEO of VMware to rejoin the company that he parted ways with 11 years ago. Gelsinger will succeed Bob Swan, who will remain CEO until Feb. 15. Gelsinger previously spent 30 years... Read more…

By Tiffany Trader

Roar Supercomputer to Support Naval Aircraft Research

January 14, 2021

One might not think “aircraft” when picturing the U.S. Navy, but the military branch actually has thousands of aircraft currently in service – and now, supercomputing will help future naval aircraft operate faster, Read more…

By Staff report

DOE and NOAA Extend Computing Partnership, Plan for New Supercomputer

January 14, 2021

The National Climate-Computing Research Center (NCRC), hosted by Oak Ridge National Laboratory (ORNL), has been supporting the climate research of the National Oceanic and Atmospheric Administration (NOAA) for the last 1 Read more…

By Oliver Peckham

Using Micro-Combs, Researchers Demonstrate World’s Fastest Optical Neuromorphic Processor for AI

January 13, 2021

Neuromorphic computing, which uses chips that mimic the behavior of the human brain using virtual “neurons,” is growing in popularity thanks to high-profile efforts from Intel and others. Now, a team of researchers l Read more…

By Oliver Peckham

AWS Solution Channel

Now Available – Amazon EC2 C6gn Instances with 100 Gbps Networking

Amazon EC2 C6gn instances powered by AWS Graviton2 processors are now available!

Compared to C6g instances, this new instance type provides 4x higher network bandwidth, 4x higher packet processing performance, and 2x higher EBS bandwidth. Read more…

Intel® HPC + AI Pavilion

Intel Keynote Address

Intel is the foundation of HPC – from the workstation to the cloud to the backbone of the Top500. At SC20, Intel’s Trish Damkroger, VP and GM of high performance computing, addresses the audience to show how Intel and its partners are building the future of HPC today, through hardware and software technologies that accelerate the broad deployment of advanced HPC systems. Read more…

Honing In on AI, US Launches National Artificial Intelligence Initiative Office

January 13, 2021

To drive American leadership in the field of AI into the future, the National Artificial Intelligence Initiative Office has been launched by the White House Office of Science and Technology Policy (OSTP). The new agen Read more…

By Todd R. Weiss

Pat Gelsinger Returns to Intel as CEO

January 14, 2021

The Intel board of directors has appointed a new CEO. Intel alum Pat Gelsinger is leaving his post as CEO of VMware to rejoin the company that he parted ways with 11 years ago. Gelsinger will succeed Bob Swan, who will remain CEO until Feb. 15. Gelsinger previously spent 30 years... Read more…

By Tiffany Trader

Julia Update: Adoption Keeps Climbing; Is It a Python Challenger?

January 13, 2021

The rapid adoption of Julia, the open source, high level programing language with roots at MIT, shows no sign of slowing according to data from Julialang.org. I Read more…

By John Russell

Intel ‘Ice Lake’ Server Chips in Production, Set for Volume Ramp This Quarter

January 12, 2021

Intel Corp. used this week’s virtual CES 2021 event to reassert its dominance of the datacenter with the formal roll out of its next-generation server chip, the 10nm Xeon Scalable processor that targets AI and HPC workloads. The third-generation “Ice Lake” family... Read more…

By George Leopold

Researchers Say It Won’t Be Possible to Control Superintelligent AI

January 11, 2021

Worries about out-of-control AI aren’t new. Many prominent figures have suggested caution when unleashing AI. One quote that keeps cropping up is (roughly) th Read more…

By John Russell

AMD Files Patent on New GPU Chiplet Approach

January 5, 2021

Advanced Micro Devices is accelerating the GPU chiplet race with the release of a U.S. patent application for a device that incorporates high-bandwidth intercon Read more…

By George Leopold

Programming the Soon-to-Be World’s Fastest Supercomputer, Frontier

January 5, 2021

What’s it like designing an app for the world’s fastest supercomputer, set to come online in the United States in 2021? The University of Delaware’s Sunita Chandrasekaran is leading an elite international team in just that task. Chandrasekaran, assistant professor of computer and information sciences, recently was named... Read more…

By Tracey Bryant

Intel Touts Optane Performance, Teases Next-gen “Crow Pass”

January 5, 2021

Competition to leverage new memory and storage hardware with new or improved software to create better storage/memory schemes has steadily gathered steam during Read more…

By John Russell

Farewell 2020: Bleak, Yes. But a Lot of Good Happened Too

December 30, 2020

Here on the cusp of the new year, the catchphrase ‘2020 hindsight’ has a distinctly different feel. Good riddance, yes. But also proof of science’s power Read more…

By John Russell

Esperanto Unveils ML Chip with Nearly 1,100 RISC-V Cores

December 8, 2020

At the RISC-V Summit today, Art Swift, CEO of Esperanto Technologies, announced a new, RISC-V based chip aimed at machine learning and containing nearly 1,100 low-power cores based on the open-source RISC-V architecture. Esperanto Technologies, headquartered in... Read more…

By Oliver Peckham

Azure Scaled to Record 86,400 Cores for Molecular Dynamics

November 20, 2020

A new record for HPC scaling on the public cloud has been achieved on Microsoft Azure. Led by Dr. Jer-Ming Chia, the cloud provider partnered with the Beckman I Read more…

By Oliver Peckham

NICS Unleashes ‘Kraken’ Supercomputer

April 4, 2008

A Cray XT4 supercomputer, dubbed Kraken, is scheduled to come online in mid-summer at the National Institute for Computational Sciences (NICS). The soon-to-be petascale system, and the resulting NICS organization, are the result of an NSF Track II award of $65 million to the University of Tennessee and its partners to provide next-generation supercomputing for the nation's science community. Read more…

Is the Nvidia A100 GPU Performance Worth a Hardware Upgrade?

October 16, 2020

Over the last decade, accelerators have seen an increasing rate of adoption in high-performance computing (HPC) platforms, and in the June 2020 Top500 list, eig Read more…

By Hartwig Anzt, Ahmad Abdelfattah and Jack Dongarra

Aurora’s Troubles Move Frontier into Pole Exascale Position

October 1, 2020

Intel’s 7nm node delay has raised questions about the status of the Aurora supercomputer that was scheduled to be stood up at Argonne National Laboratory next year. Aurora was in the running to be the United States’ first exascale supercomputer although it was on a contemporaneous timeline with... Read more…

By Tiffany Trader

Google Hires Longtime Intel Exec Bill Magro to Lead HPC Strategy

September 18, 2020

In a sign of the times, another prominent HPCer has made a move to a hyperscaler. Longtime Intel executive Bill Magro joined Google as chief technologist for hi Read more…

By Tiffany Trader

Julia Update: Adoption Keeps Climbing; Is It a Python Challenger?

January 13, 2021

The rapid adoption of Julia, the open source, high level programing language with roots at MIT, shows no sign of slowing according to data from Julialang.org. I Read more…

By John Russell

10nm, 7nm, 5nm…. Should the Chip Nanometer Metric Be Replaced?

June 1, 2020

The biggest cool factor in server chips is the nanometer. AMD beating Intel to a CPU built on a 7nm process node* – with 5nm and 3nm on the way – has been i Read more…

By Doug Black

Leading Solution Providers

Contributors

Programming the Soon-to-Be World’s Fastest Supercomputer, Frontier

January 5, 2021

What’s it like designing an app for the world’s fastest supercomputer, set to come online in the United States in 2021? The University of Delaware’s Sunita Chandrasekaran is leading an elite international team in just that task. Chandrasekaran, assistant professor of computer and information sciences, recently was named... Read more…

By Tracey Bryant

Top500: Fugaku Keeps Crown, Nvidia’s Selene Climbs to #5

November 16, 2020

With the publication of the 56th Top500 list today from SC20's virtual proceedings, Japan's Fugaku supercomputer – now fully deployed – notches another win, Read more…

By Tiffany Trader

European Commission Declares €8 Billion Investment in Supercomputing

September 18, 2020

Just under two years ago, the European Commission formalized the EuroHPC Joint Undertaking (JU): a concerted HPC effort (comprising 32 participating states at c Read more…

By Oliver Peckham

Texas A&M Announces Flagship ‘Grace’ Supercomputer

November 9, 2020

Texas A&M University has announced its next flagship system: Grace. The new supercomputer, named for legendary programming pioneer Grace Hopper, is replacing the Ada system (itself named for mathematician Ada Lovelace) as the primary workhorse for Texas A&M’s High Performance Research Computing (HPRC). Read more…

By Oliver Peckham

At Oak Ridge, ‘End of Life’ Sometimes Isn’t

October 31, 2020

Sometimes, the old dog actually does go live on a farm. HPC systems are often cursed with short lifespans, as they are continually supplanted by the latest and Read more…

By Oliver Peckham

Nvidia and EuroHPC Team for Four Supercomputers, Including Massive ‘Leonardo’ System

October 15, 2020

The EuroHPC Joint Undertaking (JU) serves as Europe’s concerted supercomputing play, currently comprising 32 member states and billions of euros in funding. I Read more…

By Oliver Peckham

Gordon Bell Special Prize Goes to Massive SARS-CoV-2 Simulations

November 19, 2020

2020 has proven a harrowing year – but it has produced remarkable heroes. To that end, this year, the Association for Computing Machinery (ACM) introduced the Read more…

By Oliver Peckham

Nvidia-Arm Deal a Boon for RISC-V?

October 26, 2020

The $40 billion blockbuster acquisition deal that will bring chipmaker Arm into the Nvidia corporate family could provide a boost for the competing RISC-V architecture. As regulators in the U.S., China and the European Union begin scrutinizing the impact of the blockbuster deal on semiconductor industry competition and innovation, the deal has at the very least... Read more…

By George Leopold

  • arrow
  • Click Here for More Headlines
  • arrow
Do NOT follow this link or you will be banned from the site!
Share This