Flatiron Institute to Repurpose SDSC’s Gordon Supercomputer

March 16, 2017

SAN DIEGO, Calif., March 16, 2017 — The San Diego Supercomputer Center (SDSC) at the University of California San Diego and the  Simons Foundation’s Flatiron Institute in New York have reached an agreement under which the majority of SDSC’s data-intensive Gordon supercomputer will be used by Simons for ongoing research following completion of the system’s tenure as a National Science Foundation (NSF) resource on March 31.

Under the agreement, SDSC will provide high-performance computing (HPC) resources and services on Gordon for the Flatiron Institute to conduct computationally-based research in astrophysics, biology, condensed matter physics, materials science, and other domains. The two-year agreement, with an option to renew for a third year, takes effect April 1, 2017.

Under the agreement, the Flatiron Institute will have annual access to at least 90 percent of Gordon’s system capacity. SDSC will retain the rest for use by other organizations including UC San Diego’s Center for Astrophysics & Space Sciences (CASS), as well as SDSC’s OpenTopography project and various projects within the Center for Applied Internet Data Analysis (CAIDA), which is based at SDSC.

“We are delighted that the Simons Foundation has given Gordon a new lease on life after five years of service as a highly sought after XSEDE resource,” said SDSC Director Michael Norman, who also served as the principal investigator for Gordon. “We welcome the Foundation as a new partner and consider this to be a solid testimony regarding Gordon’s data-intensive capabilities and its myriad contributions to advancing scientific discovery.”

“We are excited to have a big boost to the processing capacity for our researchers and to work with the strong team from San Diego,” said Ian Fisk, co-director of the Scientific Computing Core (SCC), which is part of the Flatiron Institute.

David Spergel, director of the Flatiron Institute’s Center for Computational Astrophysics (CCA) said, “CCA researchers will use Gordon both for simulating the evolution and growth of galaxies, as well as for the analysis of large astronomical data sets.  Gordon offers us a powerful platform for attacking these challenging computational problems.”

Simons Array and Simons Observatory

The POLARBEAR project and successor project called The Simons Array, led by UC Berkeley and funded first by the Simons Foundation and then in 2015 by the NSF under a five-year, $5 million grant, will continue to use Gordon as a key resource.

“POLARBEAR and The Simons Array, which will deploy the most powerful CMB (Cosmic Microwave Background) radiation telescope and detector system ever made, are two NSF supported astronomical telescopes that observe CMB, in essence the leftover ‘heat’ from the Big Bang in the form of microwave radiation,” said Brian Keating, a professor of physics at UC San Diego’s Center for Astrophysics & Space Sciences and a co-PI for the POLARBEAR/Simons Array project.

“The POLARBEAR experiment alone collects nearly one gigabyte of data every day that must be analyzed in real time,” added Keating. “This is an intensive process that requires dozens of sophisticated tests to assure the quality of the data. Only by leveraging resources such as Gordon are we be able to continue our legacy of success.”

Gordon also will be used in conjunction with the Simons Observatory, a 5-year $40 million project awarded by the Foundation in May 2016 to a consortium of universities led by UC San Diego, UC Berkeley, Princeton University, and the University of Pennsylvania. In the Simons Observatory, new telescopes will join the existing POLARBEAR/Simons Array and Atacama Cosmology Telescopes to produce an order of magnitude more data than the current POLARBEAR experiment. An all-hands meeting for the new project will take place at SDSC this summer. A video describing the project can be viewed by clicking the image below.

Delivering the Data

The result of a five-year, $20 million NSF grant awarded in late 2009, Gordon entered production in early 2012 as one of the 50 fastest supercom­puters in the world, and the first one to use massive amounts of flash-based memory. That made it many times faster than conventional HPC systems, while having enough bandwidth to help researchers sift through tremendous amounts of data. Gordon also has been a key resource within NSF’s XSEDE (Extreme Science and Engineering Discovery Environment) project. The system will officially end its NSF duties on March 31 following two extensions from the agency.

By the end of February 2017, Gordon had supported research and education by more than 2,000 command-line users and over 7,000 gateway users, primarily through resource allocations from XSEDE.  One of Gordon’s most data-intensive tasks was to rapidly process raw data from almost one billion particle collisions as part of a project to help define the future research agenda for the Large Hadron Collider (LHC). Gordon provided auxiliary computing capacity by processing massive data sets generated by one of the LHC’s two large general-purpose particle detectors used to find the elusive Higgs particle. The around-the-clock data processing run on Gordon was completed in about four weeks’ time, making the data available for analysis several months ahead of schedule.

About the Simons Foundation

The Simons Foundation’s mission is to advance the frontiers of research in mathematics and the basic sciences, supporting discovery-driven scientific research. Co-founded in New York City by Jim and Marilyn Simons, the foundation celebrated its 20th anniversary in 2014. The Foundation makes grants in four program areas: mathematics and physical sciences, life sciences, autism research, and education and outreach. In 2016 the Foundation launched an internal research division called the Flatiron Institute, a multidisciplinary institute focused on computational science.

About SDSC

As an Organized Research Unit of UC San Diego, SDSC is considered a leader in data-intensive computing and cyberinfrastructure, providing resources, services, and expertise to the national research community, including industry and academia. Cyberinfrastructure refers to an accessible, integrated network of computer-based resources and expertise, focused on accelerating scientific inquiry and discovery. SDSC supports hundreds of multidisciplinary programs spanning a wide variety of domains, from earth sciences and biology to astrophysics, bioinformatics, and health IT. SDSC’s petascale Comet supercomputer continues to be a key resource within the National Science Foundation’s XSEDE (Extreme Science and Engineering Discovery Environment) program.


Source: SDSC

Subscribe to HPCwire's Weekly Update!

Be the most informed person in the room! Stay ahead of the tech trends with industy updates delivered to you every week!

World Cup is Lame Compared to This Competition

June 18, 2018

So you think World Cup soccer is a big deal? While I’m sure it’s very compelling to watch a bunch of athletes kick a ball around, World Cup misses the boat because it doesn’t include teams putting together their ow Read more…

By Dan Olds

IBM Demonstrates Deep Neural Network Training with Analog Memory Devices

June 18, 2018

From smarter, more personalized apps to seemingly-ubiquitous Google Assistant and Alexa devices, AI adoption is showing no signs of slowing down – and yet, the hardware used for AI is far from perfect. Currently, GPUs Read more…

By Oliver Peckham

Sandia to Take Delivery of World’s Largest Arm System

June 18, 2018

While the enterprise remains circumspect on prospects for Arm servers in the datacenter, the leadership HPC community is taking a bolder, brighter view of the x86 server CPU alternative. Amongst current and planned Arm HPC installations – i.e., the innovative Mont-Blanc project, led by Bull/Atos, the 'Isambard’ Cray XC50 going into the University of Bristol, and commitments from both Japan and France among others -- HPE is announcing that it will be supply the United States National Nuclear Security Administration (NNSA) with a 2.3 petaflops peak Arm-based system, named Astra. Read more…

By Tiffany Trader

HPE Extreme Performance Solutions

HPC and AI Convergence is Accelerating New Levels of Intelligence

Data analytics is the most valuable tool in the digital marketplace – so much so that organizations are employing high performance computing (HPC) capabilities to rapidly collect, share, and analyze endless streams of data. Read more…

IBM Accelerated Insights

Banks Boost Infrastructure to Tackle GDPR

As banks become more digital and data-driven, their IT managers are challenged with fast growing data volumes and lines-of-businesses’ (LoBs’) seemingly limitless appetite for analytics. Read more…

Challenges Face Astroinformatics as It Sorts Through the Stars

June 15, 2018

You might have seen one of those YouTube videos: they begin on Earth, slowly zooming out to the Moon, the Solar System, the Milky Way, beyond – and suddenly, you’re looking at trillions of stars. It’s a lot to take Read more…

By Oliver Peckham

Sandia to Take Delivery of World’s Largest Arm System

June 18, 2018

While the enterprise remains circumspect on prospects for Arm servers in the datacenter, the leadership HPC community is taking a bolder, brighter view of the x86 server CPU alternative. Amongst current and planned Arm HPC installations – i.e., the innovative Mont-Blanc project, led by Bull/Atos, the 'Isambard’ Cray XC50 going into the University of Bristol, and commitments from both Japan and France among others -- HPE is announcing that it will be supply the United States National Nuclear Security Administration (NNSA) with a 2.3 petaflops peak Arm-based system, named Astra. Read more…

By Tiffany Trader

The Machine Learning Hype Cycle and HPC

June 14, 2018

Like many other HPC professionals I’m following the hype cycle around machine learning/deep learning with interest. I subscribe to the view that we’re probably approaching the ‘peak of inflated expectation’ but not quite yet starting the descent into the ‘trough of disillusionment. This still raises the probability that... Read more…

By Dairsie Latimer

Xiaoxiang Zhu Receives the 2018 PRACE Ada Lovelace Award for HPC

June 13, 2018

Xiaoxiang Zhu, who works for the German Aerospace Center (DLR) and Technical University of Munich (TUM), was awarded the 2018 PRACE Ada Lovelace Award for HPC for her outstanding contributions in the field of high performance computing (HPC) in Europe. Read more…

By Elizabeth Leake

U.S Considering Launch of National Quantum Initiative

June 11, 2018

Sometime this month the U.S. House Science Committee will introduce legislation to launch a 10-year National Quantum Initiative, according to a recent report by Read more…

By John Russell

ORNL Summit Supercomputer Is Officially Here

June 8, 2018

Oak Ridge National Laboratory (ORNL) together with IBM and Nvidia celebrated the official unveiling of the Department of Energy (DOE) Summit supercomputer toda Read more…

By Tiffany Trader

Exascale USA – Continuing to Move Forward

June 6, 2018

The end of May 2018, saw several important events that continue to advance the Department of Energy’s (DOE) Exascale Computing Initiative (ECI) for the United Read more…

By Alex R. Larzelere

Exascale for the Rest of Us: Exaflops Systems Capable for Industry

June 6, 2018

Enterprise advanced scale computing – or HPC in the enterprise – is an entity unto itself, situated between (and with characteristics of) conventional enter Read more…

By Doug Black

Fracas in Frankfurt: ISC18 Cluster Competition Teams Unveiled

June 6, 2018

The Student Cluster Competition season heats up with the seventh edition of the ISC Student Cluster Competition, slated to begin on June 25th in Frankfurt, Germ Read more…

By Dan Olds

MLPerf – Will New Machine Learning Benchmark Help Propel AI Forward?

May 2, 2018

Let the AI benchmarking wars begin. Today, a diverse group from academia and industry – Google, Baidu, Intel, AMD, Harvard, and Stanford among them – releas Read more…

By John Russell

How the Cloud Is Falling Short for HPC

March 15, 2018

The last couple of years have seen cloud computing gradually build some legitimacy within the HPC world, but still the HPC industry lies far behind enterprise I Read more…

By Chris Downing

US Plans $1.8 Billion Spend on DOE Exascale Supercomputing

April 11, 2018

On Monday, the United States Department of Energy announced its intention to procure up to three exascale supercomputers at a cost of up to $1.8 billion with th Read more…

By Tiffany Trader

Deep Learning at 15 PFlops Enables Training for Extreme Weather Identification at Scale

March 19, 2018

Petaflop per second deep learning training performance on the NERSC (National Energy Research Scientific Computing Center) Cori supercomputer has given climate Read more…

By Rob Farber

Lenovo Unveils Warm Water Cooled ThinkSystem SD650 in Rampup to LRZ Install

February 22, 2018

This week Lenovo took the wraps off the ThinkSystem SD650 high-density server with third-generation direct water cooling technology developed in tandem with par Read more…

By Tiffany Trader

ORNL Summit Supercomputer Is Officially Here

June 8, 2018

Oak Ridge National Laboratory (ORNL) together with IBM and Nvidia celebrated the official unveiling of the Department of Energy (DOE) Summit supercomputer toda Read more…

By Tiffany Trader

Nvidia Responds to Google TPU Benchmarking

April 10, 2017

Nvidia highlights strengths of its newest GPU silicon in response to Google's report on the performance and energy advantages of its custom tensor processor. Read more…

By Tiffany Trader

HPE Wins $57 Million DoD Supercomputing Contract

February 20, 2018

Hewlett Packard Enterprise (HPE) today revealed details of its massive $57 million HPC contract with the U.S. Department of Defense (DoD). The deal calls for HP Read more…

By Tiffany Trader

Leading Solution Providers

SC17 Booth Video Tours Playlist

Altair @ SC17

Altair

AMD @ SC17

AMD

ASRock Rack @ SC17

ASRock Rack

CEJN @ SC17

CEJN

DDN Storage @ SC17

DDN Storage

Huawei @ SC17

Huawei

IBM @ SC17

IBM

IBM Power Systems @ SC17

IBM Power Systems

Intel @ SC17

Intel

Lenovo @ SC17

Lenovo

Mellanox Technologies @ SC17

Mellanox Technologies

Microsoft @ SC17

Microsoft

Penguin Computing @ SC17

Penguin Computing

Pure Storage @ SC17

Pure Storage

Supericro @ SC17

Supericro

Tyan @ SC17

Tyan

Univa @ SC17

Univa

Hennessy & Patterson: A New Golden Age for Computer Architecture

April 17, 2018

On Monday June 4, 2018, 2017 A.M. Turing Award Winners John L. Hennessy and David A. Patterson will deliver the Turing Lecture at the 45th International Sympo Read more…

By Staff

Google Chases Quantum Supremacy with 72-Qubit Processor

March 7, 2018

Google pulled ahead of the pack this week in the race toward "quantum supremacy," with the introduction of a new 72-qubit quantum processor called Bristlecone. Read more…

By Tiffany Trader

Google I/O 2018: AI Everywhere; TPU 3.0 Delivers 100+ Petaflops but Requires Liquid Cooling

May 9, 2018

All things AI dominated discussion at yesterday’s opening of Google’s I/O 2018 developers meeting covering much of Google's near-term product roadmap. The e Read more…

By John Russell

Nvidia Ups Hardware Game with 16-GPU DGX-2 Server and 18-Port NVSwitch

March 27, 2018

Nvidia unveiled a raft of new products from its annual technology conference in San Jose today, and despite not offering up a new chip architecture, there were still a few surprises in store for HPC hardware aficionados. Read more…

By Tiffany Trader

Pattern Computer – Startup Claims Breakthrough in ‘Pattern Discovery’ Technology

May 23, 2018

If it weren’t for the heavy-hitter technology team behind start-up Pattern Computer, which emerged from stealth today in a live-streamed event from San Franci Read more…

By John Russell

Part One: Deep Dive into 2018 Trends in Life Sciences HPC

March 1, 2018

Life sciences is an interesting lens through which to see HPC. It is perhaps not an obvious choice, given life sciences’ relative newness as a heavy user of H Read more…

By John Russell

Intel Pledges First Commercial Nervana Product ‘Spring Crest’ in 2019

May 24, 2018

At its AI developer conference in San Francisco yesterday, Intel embraced a holistic approach to AI and showed off a broad AI portfolio that includes Xeon processors, Movidius technologies, FPGAs and Intel’s Nervana Neural Network Processors (NNPs), based on the technology it acquired in 2016. Read more…

By Tiffany Trader

Google Charts Two-Dimensional Quantum Course

April 26, 2018

Quantum error correction, essential for achieving universal fault-tolerant quantum computation, is one of the main challenges of the quantum computing field and it’s top of mind for Google’s John Martinis. At a presentation last week at the HPC User Forum in Tucson, Martinis, one of the world's foremost experts in quantum computing, emphasized... Read more…

By Tiffany Trader

  • arrow
  • Click Here for More Headlines
  • arrow
Do NOT follow this link or you will be banned from the site!
Share This