OCF Delivers 600 Teraflop Supercomputer for University of Bristol

May 18, 2017

May 18, 2017 — For over a decade the University of Bristol has been contributing to world-leading and life changing scientific research using High Performance Computing (HPC), having invested over £16 million in HPC and research data storage. To continue meeting the needs of its researchers working with complex and large amounts of data, they will now benefit from a new HPC machine, named BlueCrystal 4 (BC4). Designed, integrated and configured by the HPC, storage and data analytics integrator OCF, BC4 has more than 15,000 cores making it the largest UK University system by core count and a theoretical peak performance of 600 Teraflops.

Over 1,000 researchers in areas such as paleobiology, earth science, biochemistry, mathematics, physics, molecular modeling, life sciences, and aerospace engineering will be taking advantage of the new system. BC4 is already aiding research into new medicines and drug absorption by the human body.

“We have researchers looking at whole-planet modeling with the aim of trying to understand the earth’s climate, climate change and how that’s going to evolve, as well as others looking at rotary blade design for helicopters, the mutation of genes, the spread of disease and where diseases come from,” said Dr Christopher Woods, EPSRC Research Software Engineer Fellow, University of Bristol. “Early benchmarking is showing that the new system is three times faster than our previous cluster – research that used to take a month now takes a week, and what took a week now only takes a few hours. That’s a massive improvement that’ll be a great benefit to research at the University.”

BC4 uses Lenovo NeXtScale compute nodes, each comprising of two 14 core 2.4 GHz Intel Broadwell CPUs with 128 GiB of RAM. It also includes 32 nodes of two NVIDIA Pascal P100 GPUs plus one GPU login node, designed into the rack by Lenovo’s engineering team to meet the specific requirements of the University.

Connecting the cluster are several high-speed networks, the fastest of which is a two-level Intel Omni-Path Architecture network running at 100Gb/s. BC4’s storage is composed of one PetaByte of disk provided by DDN’s GS7k and IME systems running the parallel file system Spectrum Scale from IBM.

Effective benchmarking and optimisation, using the benchmarking capabilities of Lenovo’s HPC research centre in Stuttgart, the first of its kind, has ensured that BC4 is highly efficient in terms of physical footprint, while fully utilising the 30KW per rack energy limit. Lenovo’s commitment to third party integration has allowed the University to avoid vendor lock-in while permitting new hardware to be added easily between refresh cycles.

Dr Christopher Woods continues: “To help with the interactive use of the cluster, BC4 has a visualisation node equipped with NVIDIA Grid vGPUs so it helps our scientists to visualise the work they’re doing, so researchers can use the system even if they’ve not used an HPC machine before.”

Housed at VIRTUS’ LONDON4, the UK’s first shared data centre for research and education in Slough, BC4 is the first of the University’s supercomputers to be held at an independent facility. The system is directly connected to the Bristol campus via JISC’s high speed Janet network. Kelly Scott, account director, education at VIRTUS Data Centres said, “LONDON4 is specifically designed to have the capacity to host ultra high density infrastructure and high performance computing platforms, so an ideal environment for systems like BC4. The University of Bristol is the 22nd organisation to join the JISC Shared Data Centre in our facility, which enables institutions to collaborate and share infrastructure resources to drive real innovation that advances meaningful research.”

Currently numbering in the hundreds, applications running on the University’s previous cluster will be replicated onto the new system, which will allow researchers to create more applications and better scaling software. Applications are able to be moved directly onto BC4 without the need for re-engineering.

“We’re now in our tenth year of using HPC in our facility. We’ve endeavored to make each phase of BlueCrystal bigger and better than the last, embracing new technology for the benefit of our users and researchers,” commented Caroline Gardiner, Academic Research Facilitator at the University of Bristol.

Simon Burbidge, Director of Advanced Computing comments: “It is with great excitement that I take on the role of Director of Advanced Computing at this time, and I look forward to enabling the University’s ambitious research programmes through the provision of the latest computational techniques and simulations.”

Due to be launched at an event on 24th May at the University of Bristol, BC4 will house over 1,000 system users, carried over from BlueCrystal Phase 3.


Source: OCF

Subscribe to HPCwire's Weekly Update!

Be the most informed person in the room! Stay ahead of the tech trends with industy updates delivered to you every week!

Live and in Color, Meet the European Student Cluster Teams

November 21, 2017

The SC17 Student Cluster Competition welcomed two teams from Europe, the German team of FAU/TUC and Team Poland, the pride of Warsaw. Let's get to know them better through the miracle of video..... Team FAU/TUC is a c Read more…

By Dan Olds

SC17 Student Cluster Kick Off – Guts, Glory, Grep

November 21, 2017

The SC17 Student Cluster Competition started with a well-orchestrated kick-off emceed by Stephen Harrell, the competition chair. It began with a welcome from SC17 chair Bernd Mohr, where he lauded the competition for Read more…

By Dan Olds

Activist Investor Starboard Buys 10.7% Stake in Mellanox; Sale Possible?

November 20, 2017

Starboard Value has reportedly taken a 10.7 percent stake in interconnect specialist Mellanox Technologies, and according to the Wall Street Journal, has urged the company “to improve its margins and stock and explore Read more…

By John Russell

HPE Extreme Performance Solutions

Harness Scalable Petabyte Storage with HPE Apollo 4510 and HPE StoreEver

As a growing number of connected devices challenges IT departments to rapidly collect, manage, and store troves of data, organizations must adopt a new generation of IT to help them operate quickly and intelligently. Read more…

Installation of Sierra Supercomputer Steams Along at LLNL

November 20, 2017

Sierra, the 125 petaflops (peak) machine based on IBM’s Power9 chip being built at Lawrence Livermore National Laboratory, sometimes takes a back seat to Summit, the ~200 petaflops system being built at Oak Ridge Natio Read more…

By John Russell

Live and in Color, Meet the European Student Cluster Teams

November 21, 2017

The SC17 Student Cluster Competition welcomed two teams from Europe, the German team of FAU/TUC and Team Poland, the pride of Warsaw. Let's get to know them bet Read more…

By Dan Olds

SC17 Student Cluster Kick Off – Guts, Glory, Grep

November 21, 2017

The SC17 Student Cluster Competition started with a well-orchestrated kick-off emceed by Stephen Harrell, the competition chair. It began with a welcome from Read more…

By Dan Olds

SC Bids Farewell to Denver, Heads to Dallas for 30th

November 17, 2017

After a jam-packed four-day expo and intensive six-day technical program, SC17 has wrapped up another successful event that brought together nearly 13,000 visit Read more…

By Tiffany Trader

SC17 Keynote – HPC Powers SKA Efforts to Peer Deep into the Cosmos

November 17, 2017

This week’s SC17 keynote – Life, the Universe and Computing: The Story of the SKA Telescope – was a powerful pitch for the potential of Big Science projects that also showcased the foundational role of high performance computing in modern science. It was also visually stunning. Read more…

By John Russell

How Cities Use HPC at the Edge to Get Smarter

November 17, 2017

Cities are sensoring up, collecting vast troves of data that they’re running through predictive models and using the insights to solve problems that, in some Read more…

By Doug Black

Student Cluster LINPACK Record Shattered! More LINs Packed Than Ever before!

November 16, 2017

Nanyang Technological University, the pride of Singapore, utterly destroyed the Student Cluster Competition LINPACK record by posting a score of 51.77 TFlop/s a Read more…

By Dan Olds

Hyperion Market Update: ‘Decent’ Growth Led by HPE; AI Transparency a Risk Issue

November 15, 2017

The HPC market update from Hyperion Research (formerly IDC) at the annual SC conference is a business and social “must,” and this year’s presentation at S Read more…

By Doug Black

Nvidia Focuses Its Cloud Containers on HPC Applications

November 14, 2017

Having migrated its top-of-the-line datacenter GPU to the largest cloud vendors, Nvidia is touting its Volta architecture for a range of scientific computing ta Read more…

By George Leopold

US Coalesces Plans for First Exascale Supercomputer: Aurora in 2021

September 27, 2017

At the Advanced Scientific Computing Advisory Committee (ASCAC) meeting, in Arlington, Va., yesterday (Sept. 26), it was revealed that the "Aurora" supercompute Read more…

By Tiffany Trader

NERSC Scales Scientific Deep Learning to 15 Petaflops

August 28, 2017

A collaborative effort between Intel, NERSC and Stanford has delivered the first 15-petaflops deep learning software running on HPC platforms and is, according Read more…

By Rob Farber

Oracle Layoffs Reportedly Hit SPARC and Solaris Hard

September 7, 2017

Oracle’s latest layoffs have many wondering if this is the end of the line for the SPARC processor and Solaris OS development. As reported by multiple sources Read more…

By John Russell

AMD Showcases Growing Portfolio of EPYC and Radeon-based Systems at SC17

November 13, 2017

AMD’s charge back into HPC and the datacenter is on full display at SC17. Having launched the EPYC processor line in June along with its MI25 GPU the focus he Read more…

By John Russell

Nvidia Responds to Google TPU Benchmarking

April 10, 2017

Nvidia highlights strengths of its newest GPU silicon in response to Google's report on the performance and energy advantages of its custom tensor processor. Read more…

By Tiffany Trader

Google Releases Deeplearn.js to Further Democratize Machine Learning

August 17, 2017

Spreading the use of machine learning tools is one of the goals of Google’s PAIR (People + AI Research) initiative, which was introduced in early July. Last w Read more…

By John Russell

GlobalFoundries Puts Wind in AMD’s Sails with 12nm FinFET

September 24, 2017

From its annual tech conference last week (Sept. 20), where GlobalFoundries welcomed more than 600 semiconductor professionals (reaching the Santa Clara venue Read more…

By Tiffany Trader

Amazon Debuts New AMD-based GPU Instances for Graphics Acceleration

September 12, 2017

Last week Amazon Web Services (AWS) streaming service, AppStream 2.0, introduced a new GPU instance called Graphics Design intended to accelerate graphics. The Read more…

By John Russell

Leading Solution Providers

SC17 Booth Video Tours

EU Funds 20 Million Euro ARM+FPGA Exascale Project

September 7, 2017

At the Barcelona Supercomputer Centre on Wednesday (Sept. 6), 16 partners gathered to launch the EuroEXA project, which invests €20 million over three-and-a-half years into exascale-focused research and development. Led by the Horizon 2020 program, EuroEXA picks up the banner of a triad of partner projects — ExaNeSt, EcoScale and ExaNoDe — building on their work... Read more…

By Tiffany Trader

Delays, Smoke, Records & Markets – A Candid Conversation with Cray CEO Peter Ungaro

October 5, 2017

Earlier this month, Tom Tabor, publisher of HPCwire and I had a very personal conversation with Cray CEO Peter Ungaro. Cray has been on something of a Cinderell Read more…

By Tiffany Trader & Tom Tabor

Reinders: “AVX-512 May Be a Hidden Gem” in Intel Xeon Scalable Processors

June 29, 2017

Imagine if we could use vector processing on something other than just floating point problems.  Today, GPUs and CPUs work tirelessly to accelerate algorithms Read more…

By James Reinders

Cray Moves to Acquire the Seagate ClusterStor Line

July 28, 2017

This week Cray announced that it is picking up Seagate's ClusterStor HPC storage array business for an undisclosed sum. "In short we're effectively transitioning the bulk of the ClusterStor product line to Cray," said CEO Peter Ungaro. Read more…

By Tiffany Trader

Intel Launches Software Tools to Ease FPGA Programming

September 5, 2017

Field Programmable Gate Arrays (FPGAs) have a reputation for being difficult to program, requiring expertise in specialty languages, like Verilog or VHDL. Easin Read more…

By Tiffany Trader

HPC Chips – A Veritable Smorgasbord?

October 10, 2017

For the first time since AMD's ill-fated launch of Bulldozer the answer to the question, 'Which CPU will be in my next HPC system?' doesn't have to be 'Whichever variety of Intel Xeon E5 they are selling when we procure'. Read more…

By Dairsie Latimer

Flipping the Flops and Reading the Top500 Tea Leaves

November 13, 2017

The 50th edition of the Top500 list, the biannual publication of the world’s fastest supercomputers based on public Linpack benchmarking results, was released Read more…

By Tiffany Trader

IBM Advances Web-based Quantum Programming

September 5, 2017

IBM Research is pairing its Jupyter-based Data Science Experience notebook environment with its cloud-based quantum computer, IBM Q, in hopes of encouraging a new class of entrepreneurial user to solve intractable problems that even exceed the capabilities of the best AI systems. Read more…

By Alex Woodie

Share This