PNNL, OHSU Create Joint Research Co-Laboratory to Advance Precision Medicine

February 14, 2018

PORTLAND, Ore., Feb. 14, 2018 — Pacific Northwest National Laboratory and OHSU today announced a joint collaboration to improve patient care by focusing research on highly complex sets of biomedical data, and the tools to interpret them.

The OHSU-PNNL Precision Medicine Innovation Co-Laboratory, called PMedIC, will provide a comprehensive ecosystem for scientists to utilize integrated ‘omics, data science and imaging technologies in their research in order to advance precision medicine — an approach to disease treatment that takes into account individual variability in genes, environment and lifestyle for each person.

“This effort brings together the unique and complementary strengths of Oregon’s only academic medical center, which has a reputation for innovative clinical trial designs, and a national laboratory with an international reputation for basic science and technology development in support of biological applications,” said OHSU President Joe Robertson. “Together, OHSU and PNNL will be able to solve complex problems in biomedical research that neither institution could solve alone.”

“The leading biomedical research and clinical work performed at OHSU pairs well with PNNL’s world-class expertise in data science and mass spectrometry analyses of proteins and genes,” said PNNL Director Steven Ashby. “By combining our complementary capabilities, we will make fundamental discoveries and accelerate our ability to tailor healthcare to individual patients.”

The co-laboratory will strengthen and expand the scope of existing interactions between OHSU and PNNL that already include cancer, regulation of the cardiovascular function, immunology and infection, and brain function, and add new collaborations in areas from metabolism to exposure science. The collaboration brings together the two institution’s strengths in data science, imaging and integrated ‘omics, which explores how genes, proteins and various metabolic products interact. The term arises from research that explores the function of key biological components within the context of the entire cell — genomics for genes, proteomics for proteins, and so on.

“PNNL has a reputation for excellence in the technical skill sets required for precision medicine, specifically advanced ‘omic’ platforms that measure the body’s key molecules — genes, proteins and metabolites — and the advanced data analysis methods to interpret these measurements,” said Karin Rodland, director of biomedical partnerships at PNNL. “Pairing these capabilities with the outstanding biomedical research environment and innovative clinical trials at OHSU will advance the field of precision medicine and lead to improved patient outcomes.”

In the long term, OHSU and PNNL aim to foster a generation of biomedical researchers fluent in all the aspects of the science underlying precision medicine, from clinical trials to molecular and computational biology to bioengineering and technology development — a new generation of scientists skilled in translating basic science discoveries to clinical care.

“Just as we have many neuroscientists focused on brain science at OHSU, we have many researchers taking different approaches on the path toward the goal of precision medicine,” said Mary Heinricher, associate dean of basic research, OHSU School of Medicine. “I believe one of the greatest opportunities of this collaboration is for OHSU graduate students and post-docs to have exposure to new technologies and collaborations with PNNL. This will help train the next generation of scientists.”

OHSU and PNNL first collaborated in 2015, when they formed the OHSU-PNNL Northwest Co-Laboratory for Integrated ‘Omicsand were designated a national Metabolomics Center for the Undiagnosed Disease Network, an NIH-funded national network designed to identify underlying mechanisms of very rare diseases. In 2017, the two organizations partnered on a National Cancer Institute-sponsored effort to become a Proteogenomic Translational Research Center focused on a complex form of leukemia.


Source: PNNL

Subscribe to HPCwire's Weekly Update!

Be the most informed person in the room! Stay ahead of the tech trends with industy updates delivered to you every week!

Nvidia Debuts Turing Architecture, Focusing on Real-Time Ray Tracing

August 16, 2018

From the SIGGRAPH professional graphics conference in Vancouver this week, Nvidia CEO Jensen Huang unveiled Turing, the company's next-gen GPU platform that introduces new RT Cores to accelerate ray tracing and new Tenso Read more…

By Tiffany Trader

HPC Coding: The Power of L(o)osing Control

August 16, 2018

Exascale roadmaps, exascale projects and exascale lobbyists ask, on-again-off-again, for a fundamental rewrite of major code building blocks. Otherwise, so they claim, codes will not scale up. Naturally, some exascale pr Read more…

By Tobias Weinzierl

STAQ(ing) the Quantum Computing Deck

August 16, 2018

Quantum computers – at least for now – remain noisy. That’s another way of saying unreliable and in diverse ways that often depend on the specific quantum technology used. One idea is to mitigate noisiness and perh Read more…

By John Russell

HPE Extreme Performance Solutions

Introducing the First Integrated System Management Software for HPC Clusters from HPE

How do you manage your complex, growing cluster environments? Answer that big challenge with the new HPC cluster management solution: HPE Performance Cluster Manager. Read more…

IBM Accelerated Insights

Super Problem Solving

You might think that tackling the world’s toughest problems is a job only for superheroes, but at special places such as the Oak Ridge National Laboratory, supercomputers are the real heroes. Read more…

NREL ‘Eagle’ Supercomputer to Advance Energy Tech R&D

August 14, 2018

The U.S. Department of Energy (DOE) National Renewable Energy Laboratory (NREL) has contracted with Hewlett Packard Enterprise (HPE) for a new 8-petaflops (peak) supercomputer that will be used to advance early-stage R&a Read more…

By Tiffany Trader

STAQ(ing) the Quantum Computing Deck

August 16, 2018

Quantum computers – at least for now – remain noisy. That’s another way of saying unreliable and in diverse ways that often depend on the specific quantum Read more…

By John Russell

NREL ‘Eagle’ Supercomputer to Advance Energy Tech R&D

August 14, 2018

The U.S. Department of Energy (DOE) National Renewable Energy Laboratory (NREL) has contracted with Hewlett Packard Enterprise (HPE) for a new 8-petaflops (peak Read more…

By Tiffany Trader

CERN Project Sees Orders-of-Magnitude Speedup with AI Approach

August 14, 2018

An award-winning effort at CERN has demonstrated potential to significantly change how the physics based modeling and simulation communities view machine learni Read more…

By Rob Farber

Intel Announces Cooper Lake, Advances AI Strategy

August 9, 2018

Intel's chief datacenter exec Navin Shenoy kicked off the company's Data-Centric Innovation Summit Wednesday, the day-long program devoted to Intel's datacenter Read more…

By Tiffany Trader

SLATE Update: Making Math Libraries Exascale-ready

August 9, 2018

Practically-speaking, achieving exascale computing requires enabling HPC software to effectively use accelerators – mostly GPUs at present – and that remain Read more…

By John Russell

Summertime in Washington: Some Unexpected Advanced Computing News

August 8, 2018

Summertime in Washington DC is known for its heat and humidity. That is why most people get away to either the mountains or the seashore and things slow down. H Read more…

By Alex R. Larzelere

NSF Invests $15 Million in Quantum STAQ

August 7, 2018

Quantum computing development is in full ascent as global backers aim to transcend the limitations of classical computing by leveraging the magical-seeming prop Read more…

By Tiffany Trader

By the Numbers: Cray Would Like Exascale to Be the Icing on the Cake

August 1, 2018

On its earnings call held for investors yesterday, Cray gave an accounting for its latest quarterly financials, offered future guidance and provided an update o Read more…

By Tiffany Trader

Leading Solution Providers

SC17 Booth Video Tours Playlist

Altair @ SC17

Altair

AMD @ SC17

AMD

ASRock Rack @ SC17

ASRock Rack

CEJN @ SC17

CEJN

DDN Storage @ SC17

DDN Storage

Huawei @ SC17

Huawei

IBM @ SC17

IBM

IBM Power Systems @ SC17

IBM Power Systems

Intel @ SC17

Intel

Lenovo @ SC17

Lenovo

Mellanox Technologies @ SC17

Mellanox Technologies

Microsoft @ SC17

Microsoft

Penguin Computing @ SC17

Penguin Computing

Pure Storage @ SC17

Pure Storage

Supericro @ SC17

Supericro

Tyan @ SC17

Tyan

Univa @ SC17

Univa

  • arrow
  • Click Here for More Headlines
  • arrow
Do NOT follow this link or you will be banned from the site!
Share This