Grid Technologies Start Saving Lives

By By Helen Thomson, GRIDtoday

October 30, 2006

The World of Health IT conference in Geneva, Switzerland attracted leaders in health care and IT industries from around the globe. As the first event of its kind, it addressed the need for a more integrated and interoperable health information space, and brought with it various examples of potential uses for Grid technology in health care industries.

Markku Äärimaa, former president of the Standing Committee of European Doctors (CPME), spoke to conference delegates about the biggest challenges facing health care. “IT applications will dominate most aspects of health care in the near future,” Äärimaa said. “With this, huge accumulations of patient data will appear as the health care system becomes increasingly computerized. This means new services will need to be developed.”

Grid systems may provide a means to manage the increasing volumes of patient data. Already, there are signs of improved health care arising from partnerships with Grid professionals.

Advancing Clinical Genomic Trials (ACGT) is a European Commission-funded project that uses Grid technologies to aid the treatment of cancer by providing a platform on which researchers and doctors can share clinical and laboratory data. The project was started after medical professionals realized that the best cancer treatments arose in areas where researchers were cooperating with each other.

“We realized that treatment for children with cancer of the kidney was very efficient because the clinicians involved were talking to each other and exchanging information,” said Remi Ronchaud, project coordinator of ACGT. “This information was providing better diagnosis, tumor-finding and selection of optimal cures for patients. Based on these facts, we are trying to implement a similar scenario for the treatment of breast cancer through a biomedical grid.”

Currently, researchers often have trouble sharing information because of discrepancies between data storage platforms. ACGT aims to provide a unifying architecture on which a defined and common method of storing data can be used, creating access to multiple dimensions of cancer information.

ACGT also wants to use this biomedical grid to aid the development of drug treatments. “Laboratory discoveries can be quickly deducted using the shared processing power of the grid for computer-intensive in silico simulations,” said Ronchaud. “Supposing we have four drugs that work against cancer cells, we can use the Grid to run trials to find what mix is the best for each type of tumor cell.”

Simulations use a large amount of processing power and create huge volumes of data, which can be processed quickly and efficiently using Grid resources. “We're going to be running a very power-thirsty computer program to integrate the data, and we need Grid technologies to process this information,” said Ronchaud.

His team also hopes that doctors will be able to use this grid to store patient data, referring to symptoms and signs of cancer, laboratory information, medical images, surgical results and genetic data. The ACGT platform will combine and cross-reference this data, which can then be accessed in order to match individual patient profiles with specific courses of treatment.

The ACGT project envisions a scenario whereby doctors can take biopsies before, during and after cancer treatment. The data taken from these biopsies is made anonymous and stored on the biomedical grid. New patients' genetic and biopsy information can be compared alongside a database of previous patient data. All this can be done rapidly using the shared processing power of the grid, and can result in effective personalized cancer treatment. Perhaps most importantly, though, is that this can all be done in a matter of days rather than months.

Broaching similar ground is Health-e-Child (HeC), a European-wide project which aims to improve health care industries by combining genomic and clinical data to provide doctors and researchers with a wealth of shared knowledge and resources to assist in the diagnosis and treatment of childhood illnesses.

Developed by IT experts at the University of West England (UWE), HeC is a collaboration of 15 partners around Europe, lead by Siemens Medical Solutions in Germany and funded by more than 12 million euros. “Health-e-Child will manage diverse Grid-based medical information and will provide instant access to an integrated resource for the purposes of disease modeling, knowledge discovery and medical decision support systems,” said Richard McClatchey, who is coordinating the informatics aspect of the project from the University of West England and providing expertise in managing a European Grid computer resource.

“The HeC project aims to integrate biomedical data to enable pediatricians to freely access everything from genomic, organ and tissue data to patient and population-based epidemiological data,” said McClatchey. “In other words, we provide the means to disentangle and make sense of vast sets of data in child health care.”

In the future, HeC's goal is to provide pediatric doctors and researchers uninhibited access to biomedical knowledge repositories for a much wider range of services, such as preventative health care, research, training and policy-making. One key objective of the project is to facilitate universal access to all records so that ambiguous diagnoses or complex symptoms that a doctor may rarely encounter in a patient can be compared with other similar cases, no matter where they are located across Europe.

“The grid will enable dynamic collections of doctors to work together collaboratively without re-locating,” said McClatchey. “Doctors will be able to use the system to compare how previous patients have responded to treatments, and make improved decisions about future recommendations, personalizing the health care that they are able to provide to individual children.”

The world's health care system is evolving, greatly aided by improvements in IT. Grid-based technologies can help facilitate this evolution by offering doctors and researchers the means to improve diagnoses, and helping to create rapid, effective and personalized patient treatment.

Subscribe to HPCwire's Weekly Update!

Be the most informed person in the room! Stay ahead of the tech trends with industry updates delivered to you every week!

Harvard/Google Use AI to Help Produce Astonishing 3D Map of Brain Tissue

May 10, 2024

Although LLMs are getting all the notice lately, AI techniques of many varieties are being infused throughout science. For example, Harvard researchers, Google, and colleagues published a 3D map in Science this week that Read more…

ISC Preview: Focus Will Be on Top500 and HPC Diversity 

May 9, 2024

Last year's Supercomputing 2023 in November had record attendance, but the direction of high-performance computing was a hot topic on the floor. Expect more of that at the upcoming ISC High Performance 2024, which is hap Read more…

Processor Security: Taking the Wong Path

May 9, 2024

More research at UC San Diego revealed yet another side-channel attack on x86_64 processors. The research identified a new vulnerability that allows precise control of conditional branch prediction in modern processors.� Read more…

The Ultimate 2024 Winter Class Round-Up

May 8, 2024

To make navigating easier, we have compiled a collection of all the 2024 Winter Classic News in this single page round-up. Meet The Teams   Introducing Team Lobo This is the other team from University of New Mex Read more…

How the Chip Industry is Helping a Battery Company

May 8, 2024

Chip companies, once seen as engineering pure plays, are now at the center of geopolitical intrigue. Chip manufacturing firms, especially TSMC and Intel, have become the backbone of devices with an on/off switch. Thes Read more…

Illinois Considers $20 Billion Quantum Manhattan Project Says Report

May 7, 2024

There are multiple reports that Illinois governor Jay Robert Pritzker is considering a $20 billion Quantum Manhattan-like project for the Chicago area. According to the reports, photonics quantum computer developer PsiQu Read more…

ISC Preview: Focus Will Be on Top500 and HPC Diversity 

May 9, 2024

Last year's Supercomputing 2023 in November had record attendance, but the direction of high-performance computing was a hot topic on the floor. Expect more of Read more…

Illinois Considers $20 Billion Quantum Manhattan Project Says Report

May 7, 2024

There are multiple reports that Illinois governor Jay Robert Pritzker is considering a $20 billion Quantum Manhattan-like project for the Chicago area. Accordin Read more…

The NASA Black Hole Plunge

May 7, 2024

We have all thought about it. No one has done it, but now, thanks to HPC, we see what it looks like. Hold on to your feet because NASA has released videos of wh Read more…

How Nvidia Could Use $700M Run.ai Acquisition for AI Consumption

May 6, 2024

Nvidia is touching $2 trillion in market cap purely on the brute force of its GPU sales, and there's room for the company to grow with software. The company hop Read more…

Hyperion To Provide a Peek at Storage, File System Usage with Global Site Survey

May 3, 2024

Curious how the market for distributed file systems, interconnects, and high-end storage is playing out in 2024? Then you might be interested in the market anal Read more…

Qubit Watch: Intel Process, IBM’s Heron, APS March Meeting, PsiQuantum Platform, QED-C on Logistics, FS Comparison

May 1, 2024

Intel has long argued that leveraging its semiconductor manufacturing prowess and use of quantum dot qubits will help Intel emerge as a leader in the race to de Read more…

Stanford HAI AI Index Report: Science and Medicine

April 29, 2024

While AI tools are incredibly useful in a variety of industries, they truly shine when applied to solving problems in scientific and medical discovery. Research Read more…

IBM Delivers Qiskit 1.0 and Best Practices for Transitioning to It

April 29, 2024

After spending much of its December Quantum Summit discussing forthcoming quantum software development kit Qiskit 1.0 — the first full version — IBM quietly Read more…

Nvidia H100: Are 550,000 GPUs Enough for This Year?

August 17, 2023

The GPU Squeeze continues to place a premium on Nvidia H100 GPUs. In a recent Financial Times article, Nvidia reports that it expects to ship 550,000 of its lat Read more…

Synopsys Eats Ansys: Does HPC Get Indigestion?

February 8, 2024

Recently, it was announced that Synopsys is buying HPC tool developer Ansys. Started in Pittsburgh, Pa., in 1970 as Swanson Analysis Systems, Inc. (SASI) by John Swanson (and eventually renamed), Ansys serves the CAE (Computer Aided Engineering)/multiphysics engineering simulation market. Read more…

Intel’s Server and PC Chip Development Will Blur After 2025

January 15, 2024

Intel's dealing with much more than chip rivals breathing down its neck; it is simultaneously integrating a bevy of new technologies such as chiplets, artificia Read more…

Comparing NVIDIA A100 and NVIDIA L40S: Which GPU is Ideal for AI and Graphics-Intensive Workloads?

October 30, 2023

With long lead times for the NVIDIA H100 and A100 GPUs, many organizations are looking at the new NVIDIA L40S GPU, which it’s a new GPU optimized for AI and g Read more…

Choosing the Right GPU for LLM Inference and Training

December 11, 2023

Accelerating the training and inference processes of deep learning models is crucial for unleashing their true potential and NVIDIA GPUs have emerged as a game- Read more…

Shutterstock 1606064203

Meta’s Zuckerberg Puts Its AI Future in the Hands of 600,000 GPUs

January 25, 2024

In under two minutes, Meta's CEO, Mark Zuckerberg, laid out the company's AI plans, which included a plan to build an artificial intelligence system with the eq Read more…

AMD MI3000A

How AMD May Get Across the CUDA Moat

October 5, 2023

When discussing GenAI, the term "GPU" almost always enters the conversation and the topic often moves toward performance and access. Interestingly, the word "GPU" is assumed to mean "Nvidia" products. (As an aside, the popular Nvidia hardware used in GenAI are not technically... Read more…

Nvidia’s New Blackwell GPU Can Train AI Models with Trillions of Parameters

March 18, 2024

Nvidia's latest and fastest GPU, codenamed Blackwell, is here and will underpin the company's AI plans this year. The chip offers performance improvements from Read more…

Leading Solution Providers

Contributors

Shutterstock 1285747942

AMD’s Horsepower-packed MI300X GPU Beats Nvidia’s Upcoming H200

December 7, 2023

AMD and Nvidia are locked in an AI performance battle – much like the gaming GPU performance clash the companies have waged for decades. AMD has claimed it Read more…

Eyes on the Quantum Prize – D-Wave Says its Time is Now

January 30, 2024

Early quantum computing pioneer D-Wave again asserted – that at least for D-Wave – the commercial quantum era has begun. Speaking at its first in-person Ana Read more…

The GenAI Datacenter Squeeze Is Here

February 1, 2024

The immediate effect of the GenAI GPU Squeeze was to reduce availability, either direct purchase or cloud access, increase cost, and push demand through the roof. A secondary issue has been developing over the last several years. Even though your organization secured several racks... Read more…

Intel Plans Falcon Shores 2 GPU Supercomputing Chip for 2026  

August 8, 2023

Intel is planning to onboard a new version of the Falcon Shores chip in 2026, which is code-named Falcon Shores 2. The new product was announced by CEO Pat Gel Read more…

The NASA Black Hole Plunge

May 7, 2024

We have all thought about it. No one has done it, but now, thanks to HPC, we see what it looks like. Hold on to your feet because NASA has released videos of wh Read more…

GenAI Having Major Impact on Data Culture, Survey Says

February 21, 2024

While 2023 was the year of GenAI, the adoption rates for GenAI did not match expectations. Most organizations are continuing to invest in GenAI but are yet to Read more…

China Is All In on a RISC-V Future

January 8, 2024

The state of RISC-V in China was discussed in a recent report released by the Jamestown Foundation, a Washington, D.C.-based think tank. The report, entitled "E Read more…

Q&A with Nvidia’s Chief of DGX Systems on the DGX-GB200 Rack-scale System

March 27, 2024

Pictures of Nvidia's new flagship mega-server, the DGX GB200, on the GTC show floor got favorable reactions on social media for the sheer amount of computing po Read more…

  • arrow
  • Click Here for More Headlines
  • arrow
HPCwire