Instrument Science Preps for Exascale Era

By Tiffany Trader

April 3, 2014

The Big Data and Extreme-scale Computing (BDEC) workshop that took place in February in Fukuoka, Japan, brought together luminaries from industry, academia and government to discuss today’s big data challenges in the context of extreme-scale computing. Attendees to this invitation-only event include some of the world’s foremost experts on algorithms, computer system architecture, operating systems, workflow middleware, compilers, libraries, languages and applications.

Extreme-scale computing for new instrument science Figure 1 w caption

The BDEC workshop series emphasizes the importance of systematically addressing “the ways in which the major issues associated with big data intersect with, impinge upon, and potentially change the national (and international) plans that are now being laid for achieving exascale computing.”

Among the diverse research to come out of this event was a white paper from Director of the Computation Institute in Chicago, Illinois, and grid computing pioneer, Ian Foster. In “Extreme-scale computing for new instrument science,” Foster asserts that data volumes and velocities in the experimental and observational science communities are advancing so fast, in some cases faster than Moore’s law, such that that these communities will soon require exascale-class computational environments to be productive. But what if some of the analysis work could be integrated into the instruments themselves?

The crux of Foster’s argument is that “instrument science…has the potential to greatly expand the impact of exascale technologies.”

Foster lays out an exciting future in which scientific instruments – light sources, tokomaks, telescopes, accelerators, genome sequencers, and the like – become part of a simulation model in which instrument output is used to guide experimentation. Instead of the typical linear science process where experiments involve sequential steps that can take months, exascale technologies point the way to a far more rapid process in which prior research feeds a knowledge base that is used to guide current models. In this scenario, “interesting” features can be flagged as data are being generated, and then that output is assimilated as the experiment is running, further evolving the simulation model.

Realizing an intelligent, dynamic model such as this not only requires exascale-oriented hardware and software advances says Foster, there are three specific areas that relate more directly to scientific knowledge. These are:

1. Knowledge management and fusion, to permit the rapid integration of large quantities of diverse data and the transformation of that data into actionable knowledge.
2. Rapid knowledge-based response, to enable the use of large knowledge bases to guide fully or partially automated decisions within data-driven research activities.
3. Human-centered science processes, to enable rapid specification, execution, and guidance of science processes that will often span many resources and engage many participants.

While much work has been done in the field of knowledge-based science, the coming era of instrument science is faced with unique challenges relating to “data volume, variety, and complexity, and the need to balance the complementary capabilities of human experts, computational methods, and sensor technologies,” says Foster.

“The integration of simulation and instrument represents an important example of emerging new science processes within instrument science,” explains Foster. “In general terms, the opportunity is this: computational simulations capture the best available, but imperfect, theoretical understanding of reality; data from instruments provide the best available, but imperfect, observations of reality. Confronting one with the other can help advance knowledge in a variety of ways.”

Foster points to cosmology and materials science as leading application drivers for this emerging paradigm. Whether the need is to compare virtual skies with the “real sky” via digital sky surveys or to determine defect structures in disordered material, large-scale computation is required to process instrument data and prepare the simulated realities with which observations are compared.

Subscribe to HPCwire's Weekly Update!

Be the most informed person in the room! Stay ahead of the tech trends with industy updates delivered to you every week!

Supercomputer Analysis Shows the Atmospheric Reach of the Tonga Eruption

January 21, 2022

On Saturday, an enormous eruption on the volcanic islands of Hunga Tonga and Hunga Haʻapai shook the Pacific Ocean. The explosion, which could be heard six thousand miles away in Alaska, caused tsunamis across the entir Read more…

NSB Issues US State of Science and Engineering 2022 Report

January 20, 2022

This week the National Science Board released its biannual U.S. State of Science and Engineering 2022 report, as required by the NSF Act. Broadly, the report presents a near-term view of S&E based mostly on 2019 data. To a large extent, this year’s edition echoes trends from the last few reports. The U.S. is still a world leader in R&D spending and S&E education... Read more…

Researchers Achieve 99 Percent Quantum Accuracy with Silicon-Embedded Qubits 

January 20, 2022

Researchers in Australia and the U.S. have made exciting headway in the quantum computing arms race. A multi-institutional team including the University of New South Wales and Sandia National Laboratory announced that th Read more…

Trio of Supercomputers Powers Estimate of Carbon in Earth’s Outer Core

January 20, 2022

Carbon is one of the essential building blocks of life on Earth, and it—along with hydrogen, nitrogen and oxygen—is one of the key elements researchers look for when they search for habitable planets and work to unde Read more…

Multiverse Targets ‘Quantum Computing for the Masses’

January 19, 2022

The race to deliver quantum computing solutions that shield users from the underlying complexity of quantum computing is heating up quickly. One example is Multiverse Computing, a European company, which today launched the second financial services product in its Singularity product group. The new offering, Fair Price, “delivers a higher accuracy in fair price calculations for financial... Read more…

AWS Solution Channel

shutterstock 718231072

Accelerating drug discovery with Amazon EC2 Spot Instances

This post was contributed by Cristian Măgherușan-Stanciu, Sr. Specialist Solution Architect, EC2 Spot, with contributions from Cristian Kniep, Sr. Developer Advocate for HPC and AWS Batch at AWS, Carlos Manzanedo Rueda, Principal Solutions Architect, EC2 Spot at AWS, Ludvig Nordstrom, Principal Solutions Architect at AWS, Vytautas Gapsys, project group leader at the Max Planck Institute for Biophysical Chemistry, and Carsten Kutzner, staff scientist at the Max Planck Institute for Biophysical Chemistry. Read more…

Students at SC21: Out in Front, Alongside and Behind the Scenes

January 19, 2022

The Supercomputing Conference (SC) is one of the biggest international conferences dedicated to high-performance computing, networking, storage and analysis. SC21 was a true ‘hybrid’ conference, with a total of 380 o Read more…

Supercomputer Analysis Shows the Atmospheric Reach of the Tonga Eruption

January 21, 2022

On Saturday, an enormous eruption on the volcanic islands of Hunga Tonga and Hunga Haʻapai shook the Pacific Ocean. The explosion, which could be heard six tho Read more…

NSB Issues US State of Science and Engineering 2022 Report

January 20, 2022

This week the National Science Board released its biannual U.S. State of Science and Engineering 2022 report, as required by the NSF Act. Broadly, the report presents a near-term view of S&E based mostly on 2019 data. To a large extent, this year’s edition echoes trends from the last few reports. The U.S. is still a world leader in R&D spending and S&E education... Read more…

Multiverse Targets ‘Quantum Computing for the Masses’

January 19, 2022

The race to deliver quantum computing solutions that shield users from the underlying complexity of quantum computing is heating up quickly. One example is Multiverse Computing, a European company, which today launched the second financial services product in its Singularity product group. The new offering, Fair Price, “delivers a higher accuracy in fair price calculations for financial... Read more…

Students at SC21: Out in Front, Alongside and Behind the Scenes

January 19, 2022

The Supercomputing Conference (SC) is one of the biggest international conferences dedicated to high-performance computing, networking, storage and analysis. SC Read more…

Q-Ctrl – Tackling Quantum Hardware’s Noise Problems with Software

January 13, 2022

Implementing effective error mitigation and correction is a critical next step in advancing quantum computing. While a lot of attention has been given to effort Read more…

Nvidia Defends Arm Acquisition Deal: a ‘Once-in-a-Generation Opportunity’

January 13, 2022

GPU-maker Nvidia is continuing to try to keep its proposed acquisition of British chip IP vendor Arm Ltd. alive, despite continuing concerns from several governments around the world. In its latest action, Nvidia filed a 29-page response to the U.K. government to point out a list of potential benefits of the proposed $40 billion deal. Read more…

Nvidia Buys HPC Cluster Management Company Bright Computing

January 10, 2022

Graphics chip powerhouse Nvidia today announced that it has acquired HPC cluster management company Bright Computing for an undisclosed sum. Unlike Nvidia’s bid to purchase semiconductor IP company Arm, which has been stymied by regulatory challenges, the Bright deal is a straightforward acquisition that aims to expand... Read more…

SC21 Panel on Programming Models – Tackling Data Movement, DSLs, More

January 6, 2022

How will programming future systems differ from current practice? This is an ever-present question in computing. Yet it has, perhaps, never been more pressing g Read more…

IonQ Is First Quantum Startup to Go Public; Will It be First to Deliver Profits?

November 3, 2021

On October 1 of this year, IonQ became the first pure-play quantum computing start-up to go public. At this writing, the stock (NYSE: IONQ) was around $15 and its market capitalization was roughly $2.89 billion. Co-founder and chief scientist Chris Monroe says it was fun to have a few of the company’s roughly 100 employees travel to New York to ring the opening bell of the New York Stock... Read more…

US Closes in on Exascale: Frontier Installation Is Underway

September 29, 2021

At the Advanced Scientific Computing Advisory Committee (ASCAC) meeting, held by Zoom this week (Sept. 29-30), it was revealed that the Frontier supercomputer is currently being installed at Oak Ridge National Laboratory in Oak Ridge, Tenn. The staff at the Oak Ridge Leadership... Read more…

AMD Launches Milan-X CPU with 3D V-Cache and Multichip Instinct MI200 GPU

November 8, 2021

At a virtual event this morning, AMD CEO Lisa Su unveiled the company’s latest and much-anticipated server products: the new Milan-X CPU, which leverages AMD’s new 3D V-Cache technology; and its new Instinct MI200 GPU, which provides up to 220 compute units across two Infinity Fabric-connected dies, delivering an astounding 47.9 peak double-precision teraflops. “We're in a high-performance computing megacycle, driven by the growing need to deploy additional compute performance... Read more…

Intel Reorgs HPC Group, Creates Two ‘Super Compute’ Groups

October 15, 2021

Following on changes made in June that moved Intel’s HPC unit out of the Data Platform Group and into the newly created Accelerated Computing Systems and Graphics (AXG) business unit, led by Raja Koduri, Intel is making further updates to the HPC group and announcing... Read more…

Nvidia Buys HPC Cluster Management Company Bright Computing

January 10, 2022

Graphics chip powerhouse Nvidia today announced that it has acquired HPC cluster management company Bright Computing for an undisclosed sum. Unlike Nvidia’s bid to purchase semiconductor IP company Arm, which has been stymied by regulatory challenges, the Bright deal is a straightforward acquisition that aims to expand... Read more…

D-Wave Embraces Gate-Based Quantum Computing; Charts Path Forward

October 21, 2021

Earlier this month D-Wave Systems, the quantum computing pioneer that has long championed quantum annealing-based quantum computing (and sometimes taken heat fo Read more…

Killer Instinct: AMD’s Multi-Chip MI200 GPU Readies for a Major Global Debut

October 21, 2021

AMD’s next-generation supercomputer GPU is on its way – and by all appearances, it’s about to make a name for itself. The AMD Radeon Instinct MI200 GPU (a successor to the MI100) will, over the next year, begin to power three massive systems on three continents: the United States’ exascale Frontier system; the European Union’s pre-exascale LUMI system; and Australia’s petascale Setonix system. Read more…

Three Chinese Exascale Systems Detailed at SC21: Two Operational and One Delayed

November 24, 2021

Details about two previously rumored Chinese exascale systems came to light during last week’s SC21 proceedings. Asked about these systems during the Top500 media briefing on Monday, Nov. 15, list author and co-founder Jack Dongarra indicated he was aware of some very impressive results, but withheld comment when asked directly if he had... Read more…

Leading Solution Providers

Contributors

Lessons from LLVM: An SC21 Fireside Chat with Chris Lattner

December 27, 2021

Today, the LLVM compiler infrastructure world is essentially inescapable in HPC. But back in the 2000 timeframe, LLVM (low level virtual machine) was just getting its start as a new way of thinking about how to overcome shortcomings in the Java Virtual Machine. At the time, Chris Lattner was a graduate student of... Read more…

2021 Gordon Bell Prize Goes to Exascale-Powered Quantum Supremacy Challenge

November 18, 2021

Today at the hybrid virtual/in-person SC21 conference, the organizers announced the winners of the 2021 ACM Gordon Bell Prize: a team of Chinese researchers leveraging the new exascale Sunway system to simulate quantum circuits. The Gordon Bell Prize, which comes with an award of $10,000 courtesy of HPC pioneer Gordon Bell, is awarded annually... Read more…

Julia Update: Adoption Keeps Climbing; Is It a Python Challenger?

January 13, 2021

The rapid adoption of Julia, the open source, high level programing language with roots at MIT, shows no sign of slowing according to data from Julialang.org. I Read more…

Top500: No Exascale, Fugaku Still Reigns, Polaris Debuts at #12

November 15, 2021

No exascale for you* -- at least, not within the High-Performance Linpack (HPL) territory of the latest Top500 list, issued today from the 33rd annual Supercomputing Conference (SC21), held in-person in St. Louis, Mo., and virtually, from Nov. 14–19. "We were hoping to have the first exascale system on this list but that didn’t happen," said Top500 co-author... Read more…

TACC Unveils Lonestar6 Supercomputer

November 1, 2021

The Texas Advanced Computing Center (TACC) is unveiling its latest supercomputer: Lonestar6, a three peak petaflops Dell system aimed at supporting researchers Read more…

Nvidia Defends Arm Acquisition Deal: a ‘Once-in-a-Generation Opportunity’

January 13, 2022

GPU-maker Nvidia is continuing to try to keep its proposed acquisition of British chip IP vendor Arm Ltd. alive, despite continuing concerns from several governments around the world. In its latest action, Nvidia filed a 29-page response to the U.K. government to point out a list of potential benefits of the proposed $40 billion deal. Read more…

10nm, 7nm, 5nm…. Should the Chip Nanometer Metric Be Replaced?

June 1, 2020

The biggest cool factor in server chips is the nanometer. AMD beating Intel to a CPU built on a 7nm process node* – with 5nm and 3nm on the way – has been i Read more…

Intel Launches 10nm ‘Ice Lake’ Datacenter CPU with Up to 40 Cores

April 6, 2021

The wait is over. Today Intel officially launched its 10nm datacenter CPU, the third-generation Intel Xeon Scalable processor, codenamed Ice Lake. With up to 40 Read more…

  • arrow
  • Click Here for More Headlines
  • arrow
HPCwire